RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ITGA4P13612 1032 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 CYP3A7P24462 503 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 GCGRP47871 477 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 USP11P51784 963 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 GAS6Q14393 721 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
SMC3-202ENST00000462899 LPAL2Q16609 132 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 SLC5A9Q2M3M2 681 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 N4BP2L1Q5TBK1 243 aaPredicted RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 ZNF852Q6ZMS4 543 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 MIER3Q7Z3K6 550 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 PRPF31Q8WWY3 499 aaKnown RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 ZNF516Q92618 1163 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 CCDC51Q96ER9 411 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 JPH2Q9BR39 696 aaPredicted RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 PAAF1Q9BRP4 392 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 NXF3Q9H4D5 531 aaKnown RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 HCFC1R1Q9NWW0 138 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 DNMT3BQ9UBC3 853 aaKnown RBP8.61□□□□□ -1.03
SMC3-202ENST00000462899 CACNG4Q9UBN1 327 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 GIT1Q9Y2X7 761 aa8.61□□□□□ -1.03
SMC3-202ENST00000462899 GOLGA8AA7E2F4 631 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 GOLGA8BA8MQT2 603 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 K7ESF4 209 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 M0R2N6 131 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 EML1O00423 815 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 CCL16O15467 120 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 AXLP30530 894 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
SMC3-202ENST00000462899 NRLP54845 237 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 NPEPPSP55786 919 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 PTENP60484 403 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 DMWDQ09019 674 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 LAMTOR4Q0VGL1 99 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 GRIK3Q13003 919 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 NAB2Q15742 525 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 WDR44Q5JSH3 913 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 PRSS36Q5K4E3 855 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 PPM1LQ5SGD2 360 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 PSPC1Q8WXF1 523 aaKnown RBP8.6□□□□□ -1.03
SMC3-202ENST00000462899 CHAMP1Q96JM3 812 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 TCEANC2Q96MN5 208 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 COLEC11Q9BWP8 271 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 CSRNP2Q9H175 543 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 TRPV5Q9NQA5 729 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 GDE1Q9NZC3 331 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 WASF3Q9UPY6 502 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 PPME1Q9Y570 386 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 DENND4CQ5VZ89 1909 aa8.6□□□□□ -1.03
SMC3-202ENST00000462899 NCANO14594 1321 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 SF3B1O75533 1304 aaKnown RBP eCLIP8.59□□□□□ -1.032e-6■■■■■ 60.3
SMC3-202ENST00000462899 ARNTLO00327 626 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 PRPF3O43395 683 aaKnown RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 XYLBO75191 536 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 KIF4AO95239 1232 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 TDP2O95551 362 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 PROS1P07225 676 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 SRGAP2CP0DJJ0 459 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 CHRNB1P11230 501 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 ARF4P18085 180 aaPredicted RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 GNA11P29992 359 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 CCR3P51677 355 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 PSMC5P62195 406 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 SATB1Q01826 763 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 MBTD1Q05BQ5 628 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 RAB33AQ14088 237 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 NPY5RQ15761 445 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 NTRK3Q16288 839 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 PSMD5Q16401 504 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 UVSSAQ2YD98 709 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 PABPC1LQ4VXU2 614 aaKnown RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 LIN9Q5TKA1 542 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 TANGO2Q6ICL3 276 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 NOTUMQ6P988 496 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 RTL10Q7L3V2 364 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 FERMT3Q86UX7 667 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 MAP4K3Q8IVH8 894 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 RNF149Q8NC42 400 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 SLC7A14Q8TBB6 771 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 CCDC12Q8WUD4 166 aaPredicted RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 DDX1Q92499 740 aaKnown RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 RABGGTAQ92696 567 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 TMEM143Q96AN5 459 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 ELSPBP1Q96BH3 223 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 CPB2Q96IY4 423 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 TTPALQ9BTX7 342 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 XPNPEP1Q9NQW7 623 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 VAV3Q9UKW4 847 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 MRPS17Q9Y2R5 130 aaKnown RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 CITO14578 2027 aa8.59□□□□□ -1.03
SMC3-202ENST00000462899 HELZ2Q9BYK8 2649 aaKnown RBP8.59□□□□□ -1.03
SMC3-202ENST00000462899 ATG2BQ96BY7 2078 aa8.58□□□□□ -1.04
SMC3-202ENST00000462899 KLF18A0A0U1RQI7 1052 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms