RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 RIN2Q8WYP3 895 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 FGF14Q92915 247 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 NXPE3Q969Y0 559 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 MMTAG2Q9BU76 263 aaKnown RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 RPP25Q9BUL9 199 aaKnown RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 COLEC11Q9BWP8 271 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 TRIM6Q9C030 488 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 POLR3FQ9H1D9 316 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 GPRC5CQ9NQ84 441 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 ANKEF1Q9NU02 776 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 KLK14Q9P0G3 267 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 DPP7Q9UHL4 492 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 BOLA1Q9Y3E2 137 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 R4GN57 208 aa8.75□□□□□ -1.01
CDC42BPA-210ENST00000462553 CASTOR2A6NHX0 329 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 LAD1O00515 517 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 ADAM12O43184 909 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 USO1O60763 962 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 LRRN2O75325 713 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 DCNP07585 359 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 HOXB1P14653 301 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 IGFBP6P24592 240 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 NTHL1P78549 312 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 GRIN1Q05586 938 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 TUSC3Q13454 348 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 PARM1Q6UWI2 310 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 MAML2Q8IZL2 1156 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 PJA1Q8NG27 643 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 LRRC15Q8TF66 581 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 PIK3R5Q8WYR1 880 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 BSNDQ8WZ55 320 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 CLSTN3Q9BQT9 956 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 FOXQ1Q9C009 403 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 PDZD7Q9H5P4 517 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 TSC2P49815 1807 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 CNOT1A5YKK6 2376 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 RALGAPA1Q6GYQ0 2036 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 SPAG17Q6Q759 2223 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 KIF26AQ9ULI4 1882 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 USP24Q9UPU5 2620 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 ZFHX4Q86UP3 3567 aa8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 SF3B1O75533 1304 aaKnown RBP eCLIP8.74□□□□□ -1.01
CDC42BPA-210ENST00000462553 NUP210Q8TEM1 1887 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 NR1I2O75469 434 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 RECQL4O94761 1208 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 LMNAP02545 664 aaKnown RBP8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 SP9P0CG40 484 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 XRCC6P12956 609 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PDCP20941 246 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 MUTP22033 750 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 CDC25AP30304 524 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 HOXA9P31269 272 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 STARD6P59095 220 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 CREMQ03060 361 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PDIA5Q14554 519 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PTPAQ15257 358 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PSMD5Q16401 504 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 FAM187BQ17R55 369 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 SPECC1Q5M775 1068 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 HAUS3Q68CZ6 603 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 FAM173BQ6P4H8 233 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 KCNK18Q7Z418 384 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 GRASPQ7Z6J2 395 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 HSCBQ8IWL3 235 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 HACE1Q8IYU2 909 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 ERMNQ8TAM6 284 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 LNX1Q8TBB1 728 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 SNX29Q8TEQ0 813 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 RMDN1Q96DB5 314 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PRIMPOLQ96LW4 560 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 TTPALQ9BTX7 342 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 DDX23Q9BUQ8 820 aaKnown RBP8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 CCDC113Q9H0I3 377 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 FZD8Q9H461 694 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PIDD1Q9HB75 910 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 LRWD1Q9UFC0 647 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 PARP2Q9UGN5 583 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 CDH7Q9ULB5 785 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 FRYQ5TBA9 3013 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 CHD6Q8TD26 2715 aa8.73□□□□□ -1.01
CDC42BPA-210ENST00000462553 CEP295Q9C0D2 2601 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 DENND4CQ5VZ89 1909 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 LRRIQ4A6NIV6 560 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 STK25O00506 426 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 CCL16O15467 120 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 STX6O43752 255 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 C8AP07357 584 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 POU2F2P09086 479 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 HNRNPA1P09651 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 FSHRP23945 695 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 CCT6AP40227 531 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 GPC5P78333 572 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 SF3A1Q15459 793 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 HYIQ5T013 277 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 FAM171A1Q5VUB5 890 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 EEF1DP3Q658K8 133 aa8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 ARL6IP4Q66PJ3 421 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-210ENST00000462553 DCLRE1AQ6PJP8 1040 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms