RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 CHD7Q9P2D1 2997 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 COL1A2P08123 1366 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 GBF1Q92538 1859 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 TRANK1O15050 2925 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 IGKV6-21A0A0C4DH24 114 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 TRIM43BA6NCK2 446 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 STX6O43752 255 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 B4GALT4O60513 344 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 NEMFO60524 1076 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 CAND2O75155 1236 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 PAPLNO95428 1278 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 ZNF286BP0CG31 522 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 MUTP22033 750 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 ITGB8P26012 769 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 BMP8BP34820 402 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 NASPP49321 788 aaPredicted RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 JAK3P52333 1124 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 GUCY1B3Q02153 619 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 PDIA5Q14554 519 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 GPNMBQ14956 572 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 IL17AQ16552 155 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 KIAA0753Q2KHM9 967 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 LETM2Q2VYF4 491 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 TRIM60Q495X7 471 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 ZC3H12AQ5D1E8 599 aaKnown RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 HYIQ5T013 277 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 LARP1BQ659C4 914 aaKnown RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 FAM43BQ6ZT52 329 aaPredicted RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 HSCBQ8IWL3 235 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 SULF2Q8IWU5 870 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 STK35Q8TDR2 534 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 ATP8B4Q8TF62 1192 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 TRIM43Q96BQ3 446 aaPredicted RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 GDF15Q99988 308 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 SDF4Q9BRK5 362 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 NOC4LQ9BVI4 516 aaKnown RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 RNPEPQ9H4A4 650 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 SMARCAD1Q9H4L7 1026 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 MLXIPQ9HAP2 919 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 ERAP1Q9NZ08 941 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 WRAP73Q9P2S5 460 aaPredicted RBP6.45□□□□□ -1.38
VPS36-202ENST00000462289 DCTN4Q9UJW0 460 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 PCOLCE2Q9UKZ9 415 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 PCDHB6Q9Y5E3 794 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 PCDHA10Q9Y5I2 948 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 NRCAMQ92823 1304 aa6.45□□□□□ -1.38
VPS36-202ENST00000462289 TREHO43280 583 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 SLC26A4O43511 780 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 CCNT1O60563 726 aaKnown RBP6.44□□□□□ -1.38
VPS36-202ENST00000462289 GAS7O60861 476 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 BRD1O95696 1058 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 SMIM10L2AP0DMW4 78 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 SMIM10L2BP0DMW5 78 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 XRCC6P12956 609 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS36-202ENST00000462289 STAT5BP51692 787 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 PSMC6P62333 389 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 ZNF252P-AS1Q0IIN9 211 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 PKP1Q13835 747 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 PLCB4Q15147 1175 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 EPHA7Q15375 998 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 UGCGQ16739 394 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 TTC38Q5R3I4 469 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 RASIP1Q5U651 963 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 LRCH2Q5VUJ6 765 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 C4orf19Q8IY42 314 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 PLD6Q8N2A8 252 aaKnown RBP6.44□□□□□ -1.38
VPS36-202ENST00000462289 NEK9Q8TD19 979 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 LMBR1Q8WVP7 490 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 KCNN1Q92952 543 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 GJA10Q969M2 543 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 FERMT2Q96AC1 680 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 MMTAG2Q9BU76 263 aaKnown RBP6.44□□□□□ -1.38
VPS36-202ENST00000462289 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 TEKT3Q9BXF9 490 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 ZSCAN16Q9H4T2 348 aaPredicted RBP6.44□□□□□ -1.38
VPS36-202ENST00000462289 HDAC6Q9UBN7 1215 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 ZNF215Q9UL58 517 aaPredicted RBP6.44□□□□□ -1.38
VPS36-202ENST00000462289 U3KQE9 123 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 KDM3AQ9Y4C1 1321 aa6.44□□□□□ -1.38
VPS36-202ENST00000462289 A0A1W2PPC1 479 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 RRN3P2A6NIE6 340 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 NOP56O00567 594 aaKnown RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 HBP1O60381 514 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 SLITRK3O94933 977 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 C22orf31O95567 290 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 BMP15O95972 392 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 TIMP1P01033 207 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 CXCL10P02778 98 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 RPLP2P05387 115 aaKnown RBP6.43□□□□□ -1.38
VPS36-202ENST00000462289 MYL3P08590 195 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 CLTBP09497 229 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 OR52Z1P0C646 297 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 FUT4P22083 530 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 NME2P22392 152 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 ARNTP27540 789 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 RPA1P27694 616 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 ZNF76P36508 570 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 PRKCQQ04759 706 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 MGAT3Q09327 533 aa6.43□□□□□ -1.38
VPS36-202ENST00000462289 PLCL1Q15111 1095 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms