RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 GOLPH3Q9H4A6 298 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 HSPBP1Q9NZL4 362 aa13.38□□□□□ -0.27
COL4A6-204ENST00000461897 FAM155AB1AL88 458 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-204ENST00000461897 MYO1FO00160 1098 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 MAFO75444 373 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-204ENST00000461897 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 CTNNA1P35221 906 aaKnown RBP13.37□□□□□ -0.27
COL4A6-204ENST00000461897 ADCYAP1R1P41586 468 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 FMO5P49326 533 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 PTENP60484 403 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 BFSP1Q12934 665 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 TAF1CQ15572 869 aaPredicted RBP13.37□□□□□ -0.27
COL4A6-204ENST00000461897 IFNL1Q8IU54 200 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 ATP8B4Q8TF62 1192 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 U2AF1L4Q8WU68 220 aaKnown RBP13.37□□□□□ -0.27
COL4A6-204ENST00000461897 AP1M1Q9BXS5 423 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 GPR88Q9GZN0 384 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 EXOC7Q9UPT5 735 aa13.37□□□□□ -0.27
COL4A6-204ENST00000461897 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 VGLL3A8MV65 326 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 PPFIA2O75334 1257 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 KIAA0754O94854 1291 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 TRIM49P0CI25 452 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 TRIM49CP0CI26 452 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 ITGA4P13612 1032 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 CNGA1P29973 690 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 DRG2P55039 364 aaKnown RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 SWT1Q5T5J6 900 aaKnown RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 DAAM2Q86T65 1068 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 XXYLT1Q8NBI6 393 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 KCNN1Q92952 543 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 VTI1AQ96AJ9 217 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 NAP1L3Q99457 506 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 TINF2Q9BSI4 451 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 PPME1Q9Y570 386 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 TLL2Q9Y6L7 1015 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 TMCO5BA8MYB1 307 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 BUB1BO60566 1050 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 GH1P01241 217 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 NAMPTP43490 491 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 LAMC2Q13753 1193 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 KIF22Q14807 665 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 CBWD6Q4V339 395 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 CBWD3Q5JTY5 395 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 CBWD5Q5RIA9 395 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 MORN1Q5T089 497 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 GJB7Q6PEY0 223 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 OTUD6BQ8N6M0 293 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 EMID1Q96A84 441 aaPredicted RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 RAB17Q9H0T7 212 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 SMARCAD1Q9H4L7 1026 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 RABEP2Q9H5N1 569 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 AMACRQ9UHK6 382 aa13.36□□□□□ -0.27
COL4A6-204ENST00000461897 UTP11Q9Y3A2 253 aaKnown RBP13.36□□□□□ -0.27
COL4A6-204ENST00000461897 FAM187AA6NFU0 413 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 H0YCG3 227 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 HNRNPDLO14979 420 aaKnown RBP13.35□□□□□ -0.27
COL4A6-204ENST00000461897 MAPK13O15264 365 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 DAPK3O43293 454 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 ADRB2P07550 413 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 SLC26A2P50443 739 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 DLG4P78352 724 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 CAPSQ13938 189 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 DRAP1Q14919 205 aaPredicted RBP13.35□□□□□ -0.27
COL4A6-204ENST00000461897 DUPD1Q68J44 220 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 C17orf99Q6UX52 265 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 INTS8Q75QN2 995 aaKnown RBP13.35□□□□□ -0.27
COL4A6-204ENST00000461897 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 PLEKHO2Q8TD55 490 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 TLCD1Q96CP7 247 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 DNAJC12Q9UKB3 198 aa13.35□□□□□ -0.27
COL4A6-204ENST00000461897 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 ANKRD62A6NC57 917 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 GOLGA8IPA6NC78 632 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 GMNCA6NCL1 334 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 LRRIQ4A6NIV6 560 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 GOLGA8JA6NMD2 632 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 TTI1O43156 1089 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 ADCY6O43306 1168 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 LGALS2P05162 132 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 NUDT17P0C025 328 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 FLT3P36888 993 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 USP8P40818 1118 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 MCCD1P59942 119 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-204ENST00000461897 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-204ENST00000461897 BRDTQ58F21 947 aaPredicted RBP13.34□□□□□ -0.27
COL4A6-204ENST00000461897 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
COL4A6-204ENST00000461897 DCAF12L1Q5VU92 463 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms