RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 H0YCG3 227 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 MEFVO15553 781 aaPredicted RBP20.73■□□□□ 0.91
VARS-220ENST00000461874 ZMYND10O75800 440 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 HARSP12081 509 aaKnown RBP20.73■□□□□ 0.91
VARS-220ENST00000461874 PLCG1P19174 1290 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 SYT1P21579 422 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 NCKAP1LP55160 1127 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 DHX8Q14562 1220 aaKnown RBP20.73■□□□□ 0.91
VARS-220ENST00000461874 NOLC1Q14978 699 aaKnown RBP eCLIP20.73■□□□□ 0.91
VARS-220ENST00000461874 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
VARS-220ENST00000461874 C3orf58Q8NDZ4 430 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 RAD54LQ92698 747 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 STAMQ92783 540 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 REEP2Q9BRK0 252 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 PRKD2Q9BZL6 878 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 SMOC2Q9H3U7 446 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 ANKFY1Q9P2R3 1169 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 CLIC4Q9Y696 253 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 PIEZO1Q92508 2521 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 CLUHO75153 1309 aa20.73■□□□□ 0.91
VARS-220ENST00000461874 ADAM12O43184 909 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 TRAPPC3O43617 180 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 N4BP1O75113 896 aaKnown RBP20.72■□□□□ 0.91
VARS-220ENST00000461874 MCL1Q07820 350 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 MCM6Q14566 821 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 PTPAQ15257 358 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 HAUS6Q7Z4H7 955 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 RASSF8Q8NHQ8 419 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 INTS4Q96HW7 963 aaKnown RBP20.72■□□□□ 0.91
VARS-220ENST00000461874 CCSER1Q9C0I3 900 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 PIDD1Q9HB75 910 aa20.72■□□□□ 0.91
VARS-220ENST00000461874 DENND4AQ7Z401 1863 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 CLDN3O15551 220 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 ZNF131P52739 623 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 RESTQ13127 1097 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 RAB33AQ14088 237 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 SLC10A6Q3KNW5 377 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 SEZ6Q53EL9 994 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 MYCT1Q8N699 235 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 PARVGQ9HBI0 331 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 MTRRQ9UBK8 725 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 WDFY4Q6ZS81 3184 aa20.71■□□□□ 0.91
VARS-220ENST00000461874 C2orf16Q68DN1 1984 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 I3L4J1 428 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 PODXLO00592 558 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 FAM13AO94988 1023 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 PDGFBP01127 241 aaPredicted RBP20.7■□□□□ 0.9
VARS-220ENST00000461874 SCP2P22307 547 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 TKTP29401 623 aaKnown RBP20.7■□□□□ 0.9
VARS-220ENST00000461874 GBP2P32456 591 aaPredicted RBP20.7■□□□□ 0.9
VARS-220ENST00000461874 RPL9P32969 192 aaKnown RBP20.7■□□□□ 0.9
VARS-220ENST00000461874 OR1D2P34982 312 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 DDIT3P35638 169 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 BRCC3P46736 316 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 IER5LQ5T953 404 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 C18orf25Q96B23 403 aaPredicted RBP20.7■□□□□ 0.9
VARS-220ENST00000461874 EPSTI1Q96J88 318 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 HAPLN2Q9GZV7 340 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 KCNK12Q9HB15 430 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 EPS15L1Q9UBC2 864 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 BACE2Q9Y5Z0 518 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 TRIP11Q15643 1979 aa20.7■□□□□ 0.9
VARS-220ENST00000461874 KRT18P05783 430 aaKnown RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 HNRNPA1P09651 372 aaKnown RBP eCLIP20.69■□□□□ 0.9
VARS-220ENST00000461874 MARCKSP29966 332 aaPredicted RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 MATR3P43243 847 aaKnown RBP eCLIP20.69■□□□□ 0.9
VARS-220ENST00000461874 TDGQ13569 410 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 LIN9Q5TKA1 542 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 FAM173BQ6P4H8 233 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 RSPO2Q6UXX9 243 aaPredicted RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 ANKS3Q6ZW76 656 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 USP49Q70CQ1 688 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 LARP4BQ92615 738 aaKnown RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 BICD1Q96G01 975 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 MYADMQ96S97 322 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 IGSF9Q9P2J2 1179 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 FBXO2Q9UK22 296 aaPredicted RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 TBX20Q9UMR3 447 aa20.69■□□□□ 0.9
VARS-220ENST00000461874 SRPRBQ9Y5M8 271 aaKnown RBP20.69■□□□□ 0.9
VARS-220ENST00000461874 MTCL1Q9Y4B5 1905 aaKnown RBP20.68■□□□□ 0.9
VARS-220ENST00000461874 K7ENM7 598 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 TRAK2O60296 914 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 PIGRP01833 764 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 C8AP07357 584 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 CLTAP09496 248 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 AVPR2P30518 371 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 VCPP55072 806 aaKnown RBP20.68■□□□□ 0.9
VARS-220ENST00000461874 NHLH1Q02575 133 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 SPECC1Q5M775 1068 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 PPM1LQ5SGD2 360 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 FIZ1Q96SL8 496 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 PLEKHA5Q9HAU0 1116 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.68■□□□□ 0.9
VARS-220ENST00000461874 MTMR6Q9Y217 621 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 CDY1Q9Y6F8 540 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 VWA8A3KMH1 1905 aa20.68■□□□□ 0.9
VARS-220ENST00000461874 MYH11P35749 1972 aa20.67■□□□□ 0.9
VARS-220ENST00000461874 K7ELQ4 463 aaPredicted RBP20.67■□□□□ 0.9
VARS-220ENST00000461874 TBCAO75347 108 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms