RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 IL18RAPO95256 599 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 NFICP08651 508 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 STX1AQ16623 288 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 CT47A1Q5JQC4 288 aaPredicted RBP12.24□□□□□ -0.45
SSBP1-202ENST00000461433 HABP4Q5JVS0 413 aaKnown RBP12.24□□□□□ -0.45
SSBP1-202ENST00000461433 CEP135Q66GS9 1140 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 EFCAB13Q8IY85 973 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 C18orf25Q96B23 403 aaPredicted RBP12.24□□□□□ -0.45
SSBP1-202ENST00000461433 TIFAQ96CG3 184 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 LRCH3Q96II8 777 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 PAAF1Q9BRP4 392 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 C17orf80Q9BSJ5 609 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 ANO10Q9NW15 660 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 CACNG4Q9UBN1 327 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 PTPRJQ12913 1337 aa12.24□□□□□ -0.45
SSBP1-202ENST00000461433 CETN3O15182 167 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 GALTP07902 379 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 IGFBP6P24592 240 aaPredicted RBP12.23□□□□□ -0.45
SSBP1-202ENST00000461433 PSMC2P35998 433 aaKnown RBP12.23□□□□□ -0.45
SSBP1-202ENST00000461433 PBX3P40426 434 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 BCAR1P56945 870 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 ERVK-21P61565 698 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 RNASELQ05823 741 aaKnown RBP12.23□□□□□ -0.45
SSBP1-202ENST00000461433 PSMD6Q15008 389 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 SCARA3Q6AZY7 606 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 COLGALT1Q8NBJ5 622 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 FAM84AQ96KN4 292 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 TSPAN18Q96SJ8 248 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 POP1Q99575 1024 aaKnown RBP12.23□□□□□ -0.45
SSBP1-202ENST00000461433 MKNK1Q9BUB5 465 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 SLC28A3Q9HAS3 691 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 GOLGA2P5Q9HBQ8 144 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 TUBGCP4Q9UGJ1 667 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 DACH1Q9UI36 760 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 DERAQ9Y315 318 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 PLXNA4Q9HCM2 1894 aa12.23□□□□□ -0.45
SSBP1-202ENST00000461433 F8W810 466 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 ZC3H11AO75152 810 aaKnown RBP eCLIP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 BMPR1AP36894 532 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 SLC11A1P49279 550 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 DLG4P78352 724 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CLDN10P78369 228 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 TUSC3Q13454 348 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 C1orf220Q5T0J3 134 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 SPATA1Q5VX52 437 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 TMEM173Q86WV6 379 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 IRF2BP1Q8IU81 584 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 PARD3BQ8TEW8 1205 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 ZNF516Q92618 1163 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 RABGGTAQ92696 567 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CEP63Q96MT8 703 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 TGS1Q96RS0 853 aaKnown RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 TMEM175Q9BSA9 504 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 DNAJC25Q9H1X3 360 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 FRMD4BQ9Y2L6 1034 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CASTOR2A6NHX0 329 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 NT5C1B-RDH14C9J2C7 533 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 C5orf67F2Z3F1 127 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 NRP1O14786 923 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 LAG3P18627 525 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CYP3A5P20815 502 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 GUCY2FP51841 1108 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 HSP90AA2PQ14568 343 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 TMEM132DQ14C87 1099 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 UPP1Q16831 310 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 ANO6Q4KMQ2 910 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 EPC2Q52LR7 807 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 LMBRD2Q68DH5 695 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CD300LGQ6UXG3 332 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 NT5DC4Q86YG4 428 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 FAM186BQ8IYM0 893 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 OR5B17Q8NGF7 314 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CXorf38Q8TB03 319 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 BCL7CQ8WUZ0 217 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 CCDC127Q96BQ5 260 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 FAM193BQ96PV7 902 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 SRRTQ9BXP5 876 aaKnown RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 TTYH1Q9H313 450 aaPredicted RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 SLC38A7Q9NVC3 462 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 MARCH5Q9NX47 278 aa12.22□□□□□ -0.45
SSBP1-202ENST00000461433 UBQLN1Q9UMX0 589 aaKnown RBP12.22□□□□□ -0.45
SSBP1-202ENST00000461433 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.45
SSBP1-202ENST00000461433 SLC16A3O15427 465 aaKnown RBP12.21□□□□□ -0.45
SSBP1-202ENST00000461433 EFEMP2O95967 443 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 ALDH2P05091 517 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 CCDC192P0DO97 292 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 DLATP10515 647 aaKnown RBP12.21□□□□□ -0.45
SSBP1-202ENST00000461433 LRPAP1P30533 357 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 CLCNKBP51801 687 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 SURF1Q15526 300 aa12.21□□□□□ -0.45
SSBP1-202ENST00000461433 SPOUT1Q5T280 376 aaKnown RBP12.21□□□□□ -0.45
SSBP1-202ENST00000461433 WDR49Q8IV35 697 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms