RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 SLC43A3Q8NBI5 491 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 TMEM87AQ8NBN3 555 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 SEPT1Q8WYJ6 367 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 TNPO1Q92973 898 aaKnown RBP6.33□□□□□ -1.4
PTPN12-209ENST00000460731 AK8Q96MA6 479 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 FAM129BQ96TA1 746 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 PCYT2Q99447 389 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 GPR20Q99678 358 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 C16orf70Q9BSU1 422 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 MMTAG2Q9BU76 263 aaKnown RBP6.33□□□□□ -1.4
PTPN12-209ENST00000460731 SCAND2PQ9GZW5 306 aaPredicted RBP6.33□□□□□ -1.4
PTPN12-209ENST00000460731 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.33□□□□□ -1.42e-7■■■■■ 29.7
PTPN12-209ENST00000460731 TTC12Q9H892 705 aaPredicted RBP6.33□□□□□ -1.4
PTPN12-209ENST00000460731 SEMA3GQ9NS98 782 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 SLC9A2Q9UBY0 812 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 FBXO2Q9UK22 296 aaPredicted RBP6.33□□□□□ -1.4
PTPN12-209ENST00000460731 CEP131Q9UPN4 1083 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 MRVI1Q9Y6F6 885 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 WDR81Q562E7 1941 aa6.33□□□□□ -1.4
PTPN12-209ENST00000460731 EMSYQ7Z589 1322 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SPTLC2O15270 562 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SLITRK3O94933 977 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 RARBP10826 455 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 COL6A1P12109 1028 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 RPA1P27694 616 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 LONP1P36776 959 aaKnown RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SLC26A2P50443 739 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 JAK3P52333 1124 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 ACTR2P61160 394 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 KRT85P78386 507 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 RING1Q06587 406 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 GRM2Q14416 872 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 LRRC41Q15345 812 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 KCNA10Q16322 511 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 FSCN1Q16658 493 aaKnown RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 GJC2Q5T442 439 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 LRCH2Q5VUJ6 765 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 ADALQ6DHV7 355 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 DTHD1Q6ZMT9 781 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 TLK2Q86UE8 772 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 DHX37Q8IY37 1157 aaKnown RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 ARRDC4Q8NCT1 418 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 KCNG4Q8TDN1 519 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 AFG1LQ8WV93 481 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 LEO1Q8WVC0 666 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 KAT2BQ92831 832 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 COPS5Q92905 334 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 CCDC74AQ96AQ1 378 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 C20orf173Q96LM9 149 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 CEP89Q96ST8 783 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SDF4Q9BRK5 362 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 POLR3CQ9BUI4 534 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 TEKT3Q9BXF9 490 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SEZ6LQ9BYH1 1024 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 FTOQ9C0B1 505 aaKnown RBP eCLIP6.32□□□□□ -1.46e-10■■■□□ 16.4
PTPN12-209ENST00000460731 CCSER1Q9C0I3 900 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 UNC45AQ9H3U1 944 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SSU72Q9NP77 194 aaKnown RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 TMEM39AQ9NV64 488 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 ZHX1Q9UKY1 873 aaPredicted RBP6.32□□□□□ -1.4
PTPN12-209ENST00000460731 TELO2Q9Y4R8 837 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 PCDHA10Q9Y5I2 948 aa6.32□□□□□ -1.4
PTPN12-209ENST00000460731 SYNRGQ9UMZ2 1314 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 MYH15Q9Y2K3 1946 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 A0A1W2PQ27 194 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 A0A1W2PQ64 194 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 A0A1W2PQD8 194 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 MYADML2A6NDP7 307 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 DNM1LO00429 736 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 GAS7O60861 476 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CUTAO60888 179 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CABYRO75952 493 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 F2P00734 622 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 P4HBP07237 508 aaKnown RBP6.31□□□□□ -1.4
PTPN12-209ENST00000460731 MMP3P08254 477 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 SUPT20HL2P0C7V6 817 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 ATP2B1P20020 1258 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 PTGS1P23219 599 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CMA1P23946 247 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CPT1AP50416 773 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CDK7P50613 346 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 ADAM17P78536 824 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 PURAQ00577 322 aaKnown RBP6.31□□□□□ -1.4
PTPN12-209ENST00000460731 GRIN1Q05586 938 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 TARBP2Q15633 366 aaKnown RBP6.31□□□□□ -1.4
PTPN12-209ENST00000460731 DGKDQ16760 1214 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 UBE3DQ7Z6J8 389 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 C4orf19Q8IY42 314 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 PCSK9Q8NBP7 692 aaKnown RBP6.31□□□□□ -1.4
PTPN12-209ENST00000460731 NEK9Q8TD19 979 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 U2AF1L4Q8WU68 220 aaKnown RBP6.31□□□□□ -1.4
PTPN12-209ENST00000460731 GJA10Q969M2 543 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 SPATA33Q96N06 139 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 AP5M1Q9H0R1 490 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 DNAJC25Q9H1X3 360 aa6.31□□□□□ -1.4
PTPN12-209ENST00000460731 NSUN3Q9H649 340 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms