RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 LY75O60449 1722 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 CCDC188H7C350 402 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 ZNF862O60290 1169 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 PGK2P07205 417 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 ZNF131P52739 623 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 ANKRD20A8PQ5CZ79 823 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 DAB2IPQ5VWQ8 1189 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 NOP9Q86U38 636 aaKnown RBP16.45■□□□□ 0.22
LMNB1-203ENST00000460265 LRRC71Q8N4P6 559 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 CYP26B1Q9NR63 512 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 L3MBTL1Q9Y468 752 aa16.45■□□□□ 0.22
LMNB1-203ENST00000460265 GMNCA6NCL1 334 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 PECAM1P16284 738 aaPredicted RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 CTNNA2P26232 953 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 LLGL2Q6P1M3 1020 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 DCUN1D2Q6PH85 259 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 MAB21L3Q8N8X9 362 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 FIZ1Q96SL8 496 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 SUCLA2Q9P2R7 463 aaPredicted RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 MTRF1LQ9UGC7 380 aaKnown RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 SYNPO2Q9UMS6 1093 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 CSDE1O75534 798 aaKnown RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 ATF7P17544 494 aaPredicted RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 CAPN12Q6ZSI9 719 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 BZW1Q7L1Q6 419 aaKnown RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 CPNE8Q86YQ8 564 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 TMEM161BQ8NDZ6 487 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 C18orf8Q96DM3 657 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 RBAKQ9NYW8 714 aaPredicted RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 ANP32DO95626 131 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 KCTD17Q8N5Z5 321 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 KLHL11Q9NVR0 708 aa16.44■□□□□ 0.22
LMNB1-203ENST00000460265 DBR1Q9UK59 544 aaKnown RBP16.44■□□□□ 0.22
LMNB1-203ENST00000460265 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
LMNB1-203ENST00000460265 ATP6V1G2O95670 118 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 EMC2Q15006 297 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 SPRED3Q2MJR0 410 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 NRBP2Q9NSY0 501 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 FBXO40Q9UH90 709 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 ANKRD33BA6NCL7 494 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 HGSO14964 777 aaPredicted RBP16.43■□□□□ 0.22
LMNB1-203ENST00000460265 CLDN3O15551 220 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 CYP11B1P15538 503 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 JAM2P57087 298 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 PAIP2Q9BPZ3 127 aaKnown RBP16.43■□□□□ 0.22
LMNB1-203ENST00000460265 GGPS1O95749 300 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 MUTP22033 750 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 DSG3P32926 999 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 CETN2P41208 172 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 TGFB2P61812 414 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 XKR3Q5GH77 459 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 CCDC137Q6PK04 289 aaKnown RBP16.43■□□□□ 0.22
LMNB1-203ENST00000460265 PLEKHO2Q8TD55 490 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 MGARPQ8TDB4 240 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 ALG3Q92685 438 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 ATP6V1G3Q96LB4 118 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 TEPSINQ96N21 525 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 DMAC2Q9NW81 257 aa16.43■□□□□ 0.22
LMNB1-203ENST00000460265 UBE4BO95155 1302 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 MOB2Q70IA6 237 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 SEC16BQ96JE7 1060 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 COG5Q9UP83 839 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 IFNB1P01574 187 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 ADSSP30520 456 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 HSD17B3P37058 310 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 STAT5BP51692 787 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 RPS6KA3P51812 740 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 GTF2BQ00403 316 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 GKAP1Q5VSY0 366 aaPredicted RBP16.42■□□□□ 0.22
LMNB1-203ENST00000460265 DENND2CQ68D51 928 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 C6orf89Q6UWU4 347 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 RUFY4Q6ZNE9 571 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 RHPN2Q8IUC4 686 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 CCDC63Q8NA47 563 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 TMEM8AQ9HCN3 771 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
LMNB1-203ENST00000460265 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 GOLGA8SH3BPF8 625 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 HLA-DRAP01903 254 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 FLT3P36888 993 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 CUL1Q13616 776 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 TBC1D1Q86TI0 1168 aaPredicted RBP16.42■□□□□ 0.22
LMNB1-203ENST00000460265 APOBEC3FQ8IUX4 373 aaKnown RBP16.42■□□□□ 0.22
LMNB1-203ENST00000460265 RNF25Q96BH1 459 aaPredicted RBP16.42■□□□□ 0.22
LMNB1-203ENST00000460265 HAUS1Q96CS2 278 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 KREMEN1Q96MU8 473 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 PCDHB18PQ96TA0 734 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 FAM167BQ9BTA0 163 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 CYP39A1Q9NYL5 469 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 GGA2Q9UJY4 613 aa16.42■□□□□ 0.22
LMNB1-203ENST00000460265 RPS12P25398 132 aaKnown RBP16.41■□□□□ 0.22
LMNB1-203ENST00000460265 ADCY8P40145 1251 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 FSTL1Q12841 308 aa16.41■□□□□ 0.22
LMNB1-203ENST00000460265 LRRC57Q8N9N7 239 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms