RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 CCDC154A6NI56 674 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 RNASET2O00584 256 aaKnown RBP4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 LAG3P18627 525 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 IBSPP21815 317 aaPredicted RBP4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 WASP42768 502 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 SLC16A1P53985 500 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 TARDBPQ13148 414 aaKnown RBP eCLIP4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 UAP1L1Q3KQV9 507 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 EFCAB2Q5VUJ9 269 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 OTUD7BQ6GQQ9 843 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 RHOUQ7L0Q8 258 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 MIGA2Q7L4E1 593 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 RPUSD2Q8IZ73 545 aaKnown RBP4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 CASKIN2Q8WXE0 1202 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 LENG9Q96B70 501 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 COA7Q96BR5 231 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 TMX3Q96JJ7 454 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 ZSWIM1Q9BR11 485 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 TDP1Q9NUW8 608 aa4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 NOP58Q9Y2X3 529 aaKnown RBP4.87□□□□□ -1.63
SNORD42A-201ENST00000459584 CENPVL1A0A0U1RR11 272 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 CCDC78A2IDD5 438 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 UNC119BA6NIH7 251 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 KIAA0391O15091 583 aaKnown RBP4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 ABHD16AO95870 558 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 KRT4P19013 534 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 AGAP9Q5VTM2 703 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 KCNV1Q6PIU1 500 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 Q6ZPA2 131 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 SEM1Q6ZVN7 128 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 RSPH3Q86UC2 560 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 PLXDC1Q8IUK5 500 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 DRC7Q8IY82 874 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 DCBLD1Q8N8Z6 715 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 CPEB3Q8NE35 698 aaKnown RBP4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 OR56A1Q8NGH5 318 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 HDAC10Q969S8 669 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 MYEOVQ96EZ4 313 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 GSTO2Q9H4Y5 243 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 KLHL11Q9NVR0 708 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 ATP11BQ9Y2G3 1177 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 PCDHB1Q9Y5F3 818 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 HS3ST4Q9Y661 456 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 AATKQ6ZMQ8 1374 aa4.86□□□□□ -1.63
SNORD42A-201ENST00000459584 KAT6AQ92794 2004 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 DIRC3C9JPN6 131 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 TEX33O43247 280 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 ZRANB2O95218 330 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 ELANEP08246 267 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 SBK3P0C264 359 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 ZNF280AP59817 542 aaPredicted RBP4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 CTXN1P60606 82 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 TGFB2P61812 414 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 FSTL1Q12841 308 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 RESTQ13127 1097 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 BEAN1Q3B7T3 259 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 LY6G5CQ5SRR4 150 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 LRRC55Q6ZSA7 311 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 LDLRAD3Q86YD5 345 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 ULK2Q8IYT8 1036 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 CHFRQ96EP1 664 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 TTPALQ9BTX7 342 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 SLC13A1Q9BZW2 595 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 IKZF4Q9H2S9 585 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 COL4A3Q01955 1670 aa4.85□□□□□ -1.63
SNORD42A-201ENST00000459584 hCG_2014768A0A024R1R8 64 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 TMEM200CA6NKL6 621 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 SPATA31D3P0C874 917 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 KRT85P78386 507 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 CDC42EP1Q00587 391 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 CREMQ03060 361 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 TP53BP2Q13625 1128 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 PTPAQ15257 358 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 LAIR1Q6GTX8 287 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 SPATA31D4Q6ZUB0 917 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 MAPKAPK5Q8IW41 473 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 RHOT2Q8IXI1 618 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 IFI44Q8TCB0 444 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 CLPTM1LQ96KA5 538 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 ADAM2Q99965 735 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 WDR11Q9BZH6 1224 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 BRINP2Q9C0B6 783 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 C11orf54Q9H0W9 315 aaPredicted RBP4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 DKK2Q9UBU2 259 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 USP25Q9UHP3 1055 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 FPGT-TNNI3KV9GXZ4 949 aa4.84□□□□□ -1.63
SNORD42A-201ENST00000459584 SHROOM4Q9ULL8 1493 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 A0A1B0GTW7 788 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 GAGE12BA1L429 117 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 CDHR4A6H8M9 788 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 GAGE12HA6NDE8 117 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 CFIP05156 583 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 CKBP12277 381 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 DDX6P26196 483 aaKnown RBP eCLIP4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 SLC6A4P31645 630 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 ADKP55263 362 aaKnown RBP4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 NOMO3P69849 1222 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 HSD11B2P80365 405 aa4.83□□□□□ -1.64
SNORD42A-201ENST00000459584 DPTQ07507 201 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms