RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 PLEKHA4Q9H4M7 779 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 ARHGEF3Q9NR81 526 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 FNIP2Q9P278 1114 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 EPG5Q9HCE0 2579 aa17.29■□□□□ 0.36
CHCHD3-204ENST00000457942 CD2BP2O95400 341 aaKnown RBP17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 SRFP11831 508 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 PUM1Q14671 1186 aaKnown RBP eCLIP17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 RSPO4Q2I0M5 234 aaPredicted RBP17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 LIN9Q5TKA1 542 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 RINT1Q6NUQ1 792 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 ZC3H14Q6PJT7 736 aaKnown RBP17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 SLC44A3Q8N4M1 653 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 HDAC7Q8WUI4 952 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 CXCL16Q9H2A7 254 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 TOPORSQ9NS56 1045 aaPredicted RBP17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 WNT16Q9UBV4 365 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 TNFSF13BQ9Y275 285 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 CEP250Q9BV73 2442 aa17.28■□□□□ 0.36
CHCHD3-204ENST00000457942 CITO14578 2027 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 STRN3Q13033 797 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 CYP26C1Q6V0L0 522 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 KCNK18Q7Z418 384 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 RUBCNQ92622 972 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 MMTAG2Q9BU76 263 aaKnown RBP17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 TIPINQ9BVW5 301 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 TARS2Q9BW92 718 aaKnown RBP17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 NT5C3AQ9H0P0 336 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 CDT1Q9H211 546 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 SEMA4AQ9H3S1 761 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 WDR6Q9NNW5 1121 aaKnown RBP17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 SIT1Q9Y3P8 196 aa17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 RBM19Q9Y4C8 960 aaKnown RBP17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.27■□□□□ 0.36
CHCHD3-204ENST00000457942 VWA8A3KMH1 1905 aa17.27■□□□□ 0.35
CHCHD3-204ENST00000457942 SFI1A8K8P3 1242 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 SLC16A4O15374 487 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 B3GAT3O94766 335 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 SMTNP53814 917 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 LARP1BQ659C4 914 aaKnown RBP17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 PDXDC1Q6P996 788 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 C1orf186Q6ZWK4 172 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 C1orf210Q8IVY1 113 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 DAW1Q8N136 415 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 CEP120Q8N960 986 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 PIK3R5Q8WYR1 880 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 ACO2Q99798 780 aaKnown RBP17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 TMEM134Q9H6X4 195 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 C17orf75Q9HAS0 396 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 GOLGA2P5Q9HBQ8 144 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 ZDHHC7Q9NXF8 308 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 ARHGAP28Q9P2N2 729 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 ANKFY1Q9P2R3 1169 aa17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 KMT2BQ9UMN6 2715 aaPredicted RBP17.26■□□□□ 0.35
CHCHD3-204ENST00000457942 ZFHX4Q86UP3 3567 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 GLULP15104 373 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 GRM5P41594 1212 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 MATR3P43243 847 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■□□□□ 10.5
CHCHD3-204ENST00000457942 CLCNKBP51801 687 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 NAB2Q15742 525 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 ZNF707Q96C28 371 aaPredicted RBP17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 UROC1Q96N76 676 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 PPP1R10Q96QC0 940 aaKnown RBP17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 PRKD2Q9BZL6 878 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 DLGAP2Q9P1A6 1054 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 NCDNQ9UBB6 729 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 EPS15L1Q9UBC2 864 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 POLIQ9UNA4 740 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 NUMBLQ9Y6R0 609 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 CACNA1BQ00975 2339 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 OTOGLQ3ZCN5 2332 aa17.25■□□□□ 0.35
CHCHD3-204ENST00000457942 TRAPPC3O43617 180 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 ZMYND10O75800 440 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 C1RP00736 705 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 PLA2G4BP0C869 781 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 MCF2P10911 925 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 GUCY2CP25092 1073 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 MAPK7Q13164 816 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 PPM1LQ5SGD2 360 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 ARL6IP4Q66PJ3 421 aaKnown RBP17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 MPZL3Q6UWV2 235 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 TAS1R3Q7RTX0 852 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 PJA1Q8NG27 643 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 LNX1Q8TBB1 728 aaPredicted RBP17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 BICD1Q96G01 975 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 ACAP3Q96P50 834 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 PNMA5Q96PV4 448 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 CLSTN3Q9BQT9 956 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 RHOBTB2Q9BYZ6 727 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 SLC38A7Q9NVC3 462 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 DLL3Q9NYJ7 618 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 FBXW11Q9UKB1 542 aa17.24■□□□□ 0.35
CHCHD3-204ENST00000457942 SMIM28A0A1B0GU29 152 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 TMEM189-UBE2V1I3L0A0 370 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 I3L4J1 428 aa17.23■□□□□ 0.35
CHCHD3-204ENST00000457942 KINO60870 393 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms