RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
CHCHD4P3-201ENST00000455954 USP15Q9Y4E8 981 aaPredicted RBP10.74□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MSCO60682 206 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TCEA3O75764 348 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ATP5HO75947 161 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GJB6O95452 261 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 NR3C1P04150 777 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PGK2P07205 417 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CYBAP13498 195 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SCP2P22307 547 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CNGA1P29973 690 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 NCALDP61601 193 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 AP3B2Q13367 1082 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MYBPC2Q14324 1141 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CNGA2Q16280 664 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ECM1Q16610 540 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ZNF792Q3KQV3 632 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CCDC38Q502W7 563 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SPDYAQ5MJ70 313 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GPATCH4Q5T3I0 446 aaKnown RBP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 LHX8Q68G74 356 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CEP128Q6ZU80 1094 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 NELFCDQ8IXH7 590 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TEX9Q8N6V9 391 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 UBL4BQ8N7F7 174 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SYT2Q8N9I0 419 aaPredicted RBP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 OLIG1Q8TAK6 271 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 LNX1Q8TBB1 728 aaPredicted RBP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DPF3Q92784 378 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SLC35C1Q96A29 364 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PAWRQ96IZ0 340 aaKnown RBP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TRIM51Q9BSJ1 452 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TRIM7Q9C029 511 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 AZI2Q9H6S1 392 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 OLFML3Q9NRN5 406 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GRHL1Q9NZI5 618 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GCNT4Q9P109 453 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RPL26L1Q9UNX3 145 aaKnown RBP10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 KIAA1024Q9UPX6 916 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ARL2BPQ9Y2Y0 163 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ZNF536O15090 1300 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 HTTP42858 3142 aa10.73□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 E9PMD0 336 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RIPK2O43353 540 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ACTN1P12814 892 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MUTP22033 750 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RPA1P27694 616 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PSMC2P35998 433 aaKnown RBP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 COPS2P61201 443 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CAV1Q03135 178 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ZNF543Q08ER8 600 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 BNIP1Q12981 228 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GRIK3Q13003 919 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ACVR2BQ13705 512 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GIT2Q14161 759 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 PPP2R5AQ15172 486 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 E2F5Q15329 346 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ZNF568Q3ZCX4 644 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SYDE2Q5VT97 1194 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RNF43Q68DV7 783 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TTBK2Q6IQ55 1244 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SYDE1Q6ZW31 735 aaPredicted RBP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 STXBP4Q6ZWJ1 553 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ANKRD35Q8N283 1001 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TRPV1Q8NER1 839 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SLC35G2Q8TBE7 412 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ART4Q93070 314 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 BORCS6Q96GS4 357 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 AGBL1Q96MI9 1066 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RAB3IPQ96QF0 476 aaPredicted RBP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CELF4Q9BZC1 486 aaKnown RBP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 WNT8AQ9H1J5 351 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ACAD9Q9H845 621 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RXFP1Q9HBX9 757 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 GPCPD1Q9NPB8 672 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ARHGEF3Q9NR81 526 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MTUS1Q9ULD2 1270 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ACTL7BQ9Y614 415 aa10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 FRMPD2Q68DX3 1309 aaPredicted RBP10.72□□□□□ -0.69
CHCHD4P3-201ENST00000455954 DNAJC25-GNG10A0A024R161 153 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ASTN1O14525 1302 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RASGRF2O14827 1237 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 OPLAHO14841 1288 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SEPT4O43236 478 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 EVI5O60447 810 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 SHBGP04278 402 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 ICAM1P05362 532 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 VIMP08670 466 aaKnown RBP10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 RARAP10276 462 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 CCNB1P14635 433 aa10.71□□□□□ -0.69
CHCHD4P3-201ENST00000455954 MAN1A1P33908 653 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms