RNA–Protein interactions for RNA: ENST00000455240.1

PTPA-225, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-225ENST00000455240 K7ERI5 159 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 TRAPPC3O43617 180 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 SEC24BO95487 1268 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 IGFBP6P24592 240 aaPredicted RBP17.76■□□□□ 0.43
PTPA-225ENST00000455240 TKTP29401 623 aaKnown RBP17.76■□□□□ 0.43
PTPA-225ENST00000455240 GRM5P41594 1212 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 GPC5P78333 572 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 NBR1Q14596 966 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 ZNF568Q3ZCX4 644 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 PABPC1LQ4VXU2 614 aaKnown RBP17.76■□□□□ 0.43
PTPA-225ENST00000455240 CD300LGQ6UXG3 332 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 ANKS3Q6ZW76 656 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 FAM184AQ8NB25 1140 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 PJA1Q8NG27 643 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 ITFG1Q8TB96 612 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 SNX29Q8TEQ0 813 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 DDX27Q96GQ7 796 aaKnown RBP17.76■□□□□ 0.43
PTPA-225ENST00000455240 SHDQ96IW2 340 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 CCDC94Q9BW85 323 aaPredicted RBP17.76■□□□□ 0.43
PTPA-225ENST00000455240 RAB34Q9BZG1 259 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 FOXQ1Q9C009 403 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 SEMA4AQ9H3S1 761 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 TOPORSQ9NS56 1045 aaPredicted RBP17.76■□□□□ 0.43
PTPA-225ENST00000455240 KCNH3Q9ULD8 1083 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 STK24Q9Y6E0 443 aa17.76■□□□□ 0.43
PTPA-225ENST00000455240 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 CCDC169A6NNP5 214 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 NPTX2P47972 431 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 YARSP54577 528 aaKnown RBP17.75■□□□□ 0.43
PTPA-225ENST00000455240 STARD6P59095 220 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 FOXK2Q01167 660 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 DMP1Q13316 513 aaPredicted RBP17.75■□□□□ 0.43
PTPA-225ENST00000455240 PDIA5Q14554 519 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 RSPO2Q6UXX9 243 aaPredicted RBP17.75■□□□□ 0.43
PTPA-225ENST00000455240 NPAS3Q8IXF0 933 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 CEP120Q8N960 986 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 IGSF22Q8N9C0 903 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 C3orf58Q8NDZ4 430 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 ZSCAN31Q96LW9 406 aaPredicted RBP17.75■□□□□ 0.43
PTPA-225ENST00000455240 ACO2Q99798 780 aaKnown RBP17.75■□□□□ 0.43
PTPA-225ENST00000455240 MRPL4Q9BYD3 311 aaKnown RBP17.75■□□□□ 0.43
PTPA-225ENST00000455240 CDT1Q9H211 546 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 SLC38A7Q9NVC3 462 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 HCFC1R1Q9NWW0 138 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 CACNA1AO00555 2505 aa17.75■□□□□ 0.43
PTPA-225ENST00000455240 I3L4J1 428 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 LMNAP02545 664 aaKnown RBP17.74■□□□□ 0.43
PTPA-225ENST00000455240 BRCC3P46736 316 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 PEX3P56589 373 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 SOX4Q06945 474 aaPredicted RBP17.74■□□□□ 0.43
PTPA-225ENST00000455240 PTGDRQ13258 359 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 XKR4Q5GH76 650 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 ALKAL1Q6UXT8 129 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 C1orf210Q8IVY1 113 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 KCNG4Q8TDN1 519 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 TMEM134Q9H6X4 195 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 PTPRHQ9HD43 1115 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 SH2B1Q9NRF2 756 aaPredicted RBP17.74■□□□□ 0.43
PTPA-225ENST00000455240 ARHGAP28Q9P2N2 729 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 DNMT3BQ9UBC3 853 aaKnown RBP17.74■□□□□ 0.43
PTPA-225ENST00000455240 R4GN57 208 aa17.74■□□□□ 0.43
PTPA-225ENST00000455240 HIP1RO75146 1068 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 GLULP15104 373 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 U2AF2P26368 475 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTPA-225ENST00000455240 OSTNP61366 133 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
PTPA-225ENST00000455240 MLF2Q15773 248 aaPredicted RBP17.73■□□□□ 0.43
PTPA-225ENST00000455240 ERICH6BQ5W0A0 696 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 SLC8B1Q6J4K2 584 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 ZC3H14Q6PJT7 736 aaKnown RBP17.73■□□□□ 0.43
PTPA-225ENST00000455240 TAS1R3Q7RTX0 852 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 DAW1Q8N136 415 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 ING5Q8WYH8 240 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 KXD1Q9BQD3 176 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 DDX23Q9BUQ8 820 aaKnown RBP17.73■□□□□ 0.43
PTPA-225ENST00000455240 RUSC1Q9BVN2 902 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 DNM3Q9UQ16 869 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 MRPS23Q9Y3D9 190 aaKnown RBP17.73■□□□□ 0.43
PTPA-225ENST00000455240 PCDHB6Q9Y5E3 794 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 COL4A3Q01955 1670 aa17.73■□□□□ 0.43
PTPA-225ENST00000455240 GPR179Q6PRD1 2367 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 PDCD11Q14690 1871 aaKnown RBP17.72■□□□□ 0.43
PTPA-225ENST00000455240 KANSL1LA0AUZ9 987 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 E9PMD0 336 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 LAD1O00515 517 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 PODXLO00592 558 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 SP9P0CG40 484 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 MCF2P10911 925 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 TOB1P50616 345 aaPredicted RBP17.72■□□□□ 0.43
PTPA-225ENST00000455240 PFKPQ01813 784 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 ROR1Q01973 937 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 PRKCQQ04759 706 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 VARS2Q5ST30 1063 aaKnown RBP17.72■□□□□ 0.43
PTPA-225ENST00000455240 KRT79Q5XKE5 535 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 ZNF461Q8TAF7 563 aa17.72■□□□□ 0.43
PTPA-225ENST00000455240 ZMAT2Q96NC0 199 aaKnown RBP17.72■□□□□ 0.43
PTPA-225ENST00000455240 TARS2Q9BW92 718 aaKnown RBP17.72■□□□□ 0.43
PTPA-225ENST00000455240 KMT5AQ9NQR1 393 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms