RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GPR37L1O60883 481 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 TOM1L1O75674 476 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 EFEMP2O95967 443 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 TKTP29401 623 aaKnown RBP10.58□□□□□ -0.72
USP54-207ENST00000451492 STAT6P42226 847 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 ZC2HC1CQ53FD0 456 aaPredicted RBP10.58□□□□□ -0.72
USP54-207ENST00000451492 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
USP54-207ENST00000451492 ATAT1Q5SQI0 421 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 ZBTB41Q5SVQ8 909 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 RRAGBQ5VZM2 374 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 SFR1Q86XK3 245 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 KCTD17Q8N5Z5 321 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
USP54-207ENST00000451492 SNX21Q969T3 373 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 NECTIN4Q96NY8 510 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 CCSER1Q9C0I3 900 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 PIDD1Q9HB75 910 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 CHST7Q9NS84 486 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 TBC1D7Q9P0N9 293 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
USP54-207ENST00000451492 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 TBX20Q9UMR3 447 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 WDFY4Q6ZS81 3184 aa10.58□□□□□ -0.72
USP54-207ENST00000451492 A0A087X0B3 334 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 TISP43B9A030 160 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 MEFVO15553 781 aaPredicted RBP10.57□□□□□ -0.72
USP54-207ENST00000451492 ADAM12O43184 909 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 ASGR2P07307 311 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 IDEP14735 1019 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 DDIT3P35638 169 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 CREMQ03060 361 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 UPP1Q16831 310 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 ELMSAN1Q6PJG2 1045 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 CCDC149Q6ZUS6 474 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 GPR149Q86SP6 731 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 NOC3LQ8WTT2 800 aaKnown RBP10.57□□□□□ -0.72
USP54-207ENST00000451492 SMG7Q92540 1137 aaKnown RBP10.57□□□□□ -0.72
USP54-207ENST00000451492 DDX12PQ92771 950 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 STAMQ92783 540 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 KIF12Q96FN5 646 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 UROC1Q96N76 676 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 NTPCRQ9BSD7 190 aaKnown RBP10.57□□□□□ -0.72
USP54-207ENST00000451492 MSTO1Q9BUK6 570 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 IKZF4Q9H2S9 585 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 SMOC2Q9H3U7 446 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 RXFP1Q9HBX9 757 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.57□□□□□ -0.72
USP54-207ENST00000451492 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 CNTN3Q9P232 1028 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 STK17AQ9UEE5 414 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
USP54-207ENST00000451492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 MYMKA6NI61 221 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 PRR33A8MZF0 331 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 SPTLC2O15270 562 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 F13A1P00488 732 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 GBP2P32456 591 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 MCM4P33991 863 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 OR1D2P34982 312 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 GUCY2FP51841 1108 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ZNF131P52739 623 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ARPP19P56211 112 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ZXDAP98168 799 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 MCL1Q07820 350 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ELAVL2Q12926 359 aaKnown RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 PKP1Q13835 747 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 PTPN21Q16825 1174 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 SLC10A6Q3KNW5 377 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 LIN9Q5TKA1 542 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 SLC39A4Q6P5W5 647 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ALKAL1Q6UXT8 129 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ZPBP2Q6X784 338 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 HFE2Q6ZVN8 426 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 SV2BQ7L1I2 683 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 GET4Q7L5D6 327 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 KREMEN2Q8NCW0 462 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 ST13P5Q8NFI4 369 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 LNX1Q8TBB1 728 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 PIK3R5Q8WYR1 880 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 EDAQ92838 391 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
USP54-207ENST00000451492 CLSTN3Q9BQT9 956 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 FNIP2Q9P278 1114 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 KCNG1Q9UIX4 513 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 POLIQ9UNA4 740 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 DOCK8Q8NF50 2099 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 CLUHO75153 1309 aa10.56□□□□□ -0.72
USP54-207ENST00000451492 TMEM221A6NGB7 291 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 ANKRD63C9JTQ0 380 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 TMEM189-UBE2V1I3L0A0 370 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 M0R296 226 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 CCL16O15467 120 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 TRAPPC3O43617 180 aa10.55□□□□□ -0.72
USP54-207ENST00000451492 GCNT3O95395 438 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms