RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ARID5AQ03989 594 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 PDE4CQ08493 712 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 GPR161Q8N6U8 529 aaKnown RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 TRIM58Q8NG06 486 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 SLC35G2Q8TBE7 412 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 AFG1LQ8WV93 481 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 ARHGAP39Q9C0H5 1083 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 CDT1Q9H211 546 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 UBE2TQ9NPD8 197 aaPredicted RBP7.12□□□□□ -1.27
USP46-202ENST00000451218 SAR1BQ9Y6B6 198 aa7.12□□□□□ -1.27
USP46-202ENST00000451218 PES1O00541 588 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 CYP26A1O43174 497 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 TSPAN1O60635 241 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 ASS1P00966 412 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 INSRRP14616 1297 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 MXI1P50539 228 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 POLGP54098 1239 aaPredicted RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 PRAMEF19Q5SWL8 479 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 UBAP2Q5T6F2 1119 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 CYP4V2Q6ZWL3 525 aaPredicted RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 HS2ST1Q7LGA3 356 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 GTF3C2Q8WUA4 911 aaPredicted RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 SLC10A4Q96EP9 437 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 ZCCHC17Q9NP64 241 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 HMGXB4Q9UGU5 601 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 BZW2Q9Y6E2 419 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 CCDC169A6NNP5 214 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 ATMINO43313 823 aaPredicted RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 KRT86O43790 486 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 FERP16591 822 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 SCP2P22307 547 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 CDH5P33151 784 aaPredicted RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 IER5Q5VY09 327 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 KCNV1Q6PIU1 500 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 IFNL1Q8IU54 200 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 MSL3Q8N5Y2 521 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 METTL13Q8N6R0 699 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 SPATA4Q8NEY3 305 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 KRT35Q92764 455 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 TINF2Q9BSI4 451 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 TXLNGYQ9BZA5 131 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 EPB41L4BQ9H329 900 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 AGO2Q9UKV8 859 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 NEU2Q9Y3R4 380 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 KIF3CO14782 793 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 MAP3K13O43283 966 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 STRNO43815 780 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 B4GALT4O60513 344 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 ZC3H11AO75152 810 aaKnown RBP eCLIP7.11□□□□□ -1.27
USP46-202ENST00000451218 CSDE1O75534 798 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 SLC26A2P50443 739 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 KIAA0753Q2KHM9 967 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 XKR4Q5GH76 650 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 ARFGAP1Q8N6T3 406 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 FBXL13Q8NEE6 735 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 ZMAT2Q96NC0 199 aaKnown RBP7.11□□□□□ -1.27
USP46-202ENST00000451218 NEUROG2Q9H2A3 272 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 GDF3Q9NR23 364 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 TLL2Q9Y6L7 1015 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 GRIN2DO15399 1336 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 SCN5AQ14524 2016 aa7.11□□□□□ -1.27
USP46-202ENST00000451218 HLA-DRAP01903 254 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 GLI1P08151 1106 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 STAT1P42224 750 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 GCLCP48506 637 aaPredicted RBP7.1□□□□□ -1.27
USP46-202ENST00000451218 CENPCQ03188 943 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 SLC10A6Q3KNW5 377 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 UBXN11Q5T124 520 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 C10orf76Q5T2E6 689 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 C1orf127Q8N9H9 656 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 TFAP2BQ92481 460 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 CCDC97Q96F63 343 aaPredicted RBP7.1□□□□□ -1.27
USP46-202ENST00000451218 TWNKQ96RR1 684 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 LRRC1Q9BTT6 524 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 CCDC94Q9BW85 323 aaPredicted RBP7.1□□□□□ -1.27
USP46-202ENST00000451218 TCRBV7S2A1N4TA0A589 114 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 FAM170AA1A519 330 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 ACKR2O00590 384 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 HNRNPDLO14979 420 aaKnown RBP7.1□□□□□ -1.27
USP46-202ENST00000451218 TOM1L1O75674 476 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 KIF4AO95239 1232 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 PFKMP08237 780 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 CDR2Q01850 454 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 TUBB2AQ13885 445 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 CLEC16AQ2KHT3 1053 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 TRNP1Q6NT89 227 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 RPUSD2Q8IZ73 545 aaKnown RBP7.1□□□□□ -1.27
USP46-202ENST00000451218 C7orf31Q8N865 590 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 ACTRT1Q8TDG2 376 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 LMBR1Q8WVP7 490 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 TUBB2BQ9BVA1 445 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 PDCL3Q9H2J4 239 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 VRTNQ9H8Y1 702 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP46-202ENST00000451218 TNFSF13BQ9Y275 285 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 UNC80Q8N2C7 3258 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 ITGA4P13612 1032 aa7.1□□□□□ -1.27
USP46-202ENST00000451218 TCF4P15884 667 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms