RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FSD2A1L4K1 749 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 TULP1O00294 542 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 ZC3H11AO75152 810 aaKnown RBP eCLIP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 AKAP3O75969 853 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 IL18RAPO95256 599 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 THP07101 528 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 PBX3P40426 434 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 FKBP3Q00688 224 aaKnown RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 POU5F1Q01860 360 aaKnown RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 SOX4Q06945 474 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 CYP24A1Q07973 514 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 DSC1Q08554 894 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 HABP4Q5JVS0 413 aaKnown RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 PPP2R2DQ66LE6 453 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 FOXR2Q6PJQ5 311 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 CD302Q8IX05 232 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 EFCAB13Q8IY85 973 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 RNF214Q8ND24 703 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 ENOX1Q8TC92 643 aaKnown RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 PLEKHO2Q8TD55 490 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 C18orf25Q96B23 403 aaPredicted RBP14.14□□□□□ -0.15
VPS33A-202ENST00000451053 TIFAQ96CG3 184 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 LRCH3Q96II8 777 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 FAM84AQ96KN4 292 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 MFSD14AQ96MC6 490 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 C17orf80Q9BSJ5 609 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 RBSNQ9H1K0 784 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 ASB7Q9H672 318 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 GOLGA2P5Q9HBQ8 144 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 CACNG4Q9UBN1 327 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 TUBGCP4Q9UGJ1 667 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 FRMD4BQ9Y2L6 1034 aa14.14□□□□□ -0.15
VPS33A-202ENST00000451053 CETN3O15182 167 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 MRE11P49959 708 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 GUCY2FP51841 1108 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 PSMD6Q15008 389 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 IQCB1Q15051 598 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
VPS33A-202ENST00000451053 SPOUT1Q5T280 376 aaKnown RBP14.13□□□□□ -0.15
VPS33A-202ENST00000451053 LMBRD2Q68DH5 695 aaPredicted RBP14.13□□□□□ -0.15
VPS33A-202ENST00000451053 COLGALT2Q8IYK4 626 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 FAM186BQ8IYM0 893 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 CSGALNACT2Q8N6G5 542 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 AOPEPQ8N6M6 819 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 COLGALT1Q8NBJ5 622 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 RABGGTAQ92696 567 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 CLP1Q92989 425 aaKnown RBP14.13□□□□□ -0.15
VPS33A-202ENST00000451053 FAM193BQ96PV7 902 aaPredicted RBP14.13□□□□□ -0.15
VPS33A-202ENST00000451053 SLC28A3Q9HAS3 691 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 MTUS1Q9ULD2 1270 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 PTPRJQ12913 1337 aa14.13□□□□□ -0.15
VPS33A-202ENST00000451053 CASTOR2A6NHX0 329 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 MAPK13O15264 365 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 FGFR1OPO95684 399 aaKnown RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 LAG3P18627 525 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 CTNNB1P35222 781 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 PSMC2P35998 433 aaKnown RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 SLC11A1P49279 550 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 BCAR1P56945 870 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 TUSC3Q13454 348 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 HSP90AA2PQ14568 343 aaPredicted RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 TMEM132DQ14C87 1099 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 ZBTB6Q15916 424 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 LUZP1Q86V48 1076 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 DHX40Q8IX18 779 aaKnown RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 CCDC127Q96BQ5 260 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 CEP63Q96MT8 703 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 POP1Q99575 1024 aaKnown RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 PAAF1Q9BRP4 392 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 MKNK1Q9BUB5 465 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 CERS4Q9HA82 394 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 GRPEL1Q9HAV7 217 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 SLC38A7Q9NVC3 462 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 UBQLN1Q9UMX0 589 aaKnown RBP14.12□□□□□ -0.15
VPS33A-202ENST00000451053 DERAQ9Y315 318 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 C2CD2Q9Y426 696 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
VPS33A-202ENST00000451053 LRRIQ3A6PVS8 624 aaPredicted RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 NT5C1B-RDH14C9J2C7 533 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 F8W810 466 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 SLC16A3O15427 465 aaKnown RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 GALTP07902 379 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 DLATP10515 647 aaKnown RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 EPB41P11171 864 aaKnown RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 BMPR1AP36894 532 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 OR1G1P47890 313 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 ERVK-21P61565 698 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 DLG4P78352 724 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 TFAMQ00059 246 aaKnown RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 SURF1Q15526 300 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 EPC2Q52LR7 807 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 SPATA1Q5VX52 437 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 TMEM173Q86WV6 379 aaPredicted RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 PARD3BQ8TEW8 1205 aa14.11□□□□□ -0.15
VPS33A-202ENST00000451053 BCL7CQ8WUZ0 217 aaPredicted RBP14.11□□□□□ -0.15
VPS33A-202ENST00000451053 BORCS6Q96GS4 357 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms