RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
MSH5-209ENST00000450148 WDR6Q9NNW5 1121 aaKnown RBP13.54□□□□□ -0.24
MSH5-209ENST00000450148 CNTN3Q9P232 1028 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 FBXW11Q9UKB1 542 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 ZDBF2Q9HCK1 2354 aa13.54□□□□□ -0.24
MSH5-209ENST00000450148 ZMYND10O75800 440 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 B3GAT3O94766 335 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 PDGFBP01127 241 aaPredicted RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 PDCP20941 246 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 BRCC3P46736 316 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 SMTNP53814 917 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 CREMQ03060 361 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 MCL1Q07820 350 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 SEZ6Q53EL9 994 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 RSPO2Q6UXX9 243 aaPredicted RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 GPBP1Q86WP2 473 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 CEP57Q86XR8 500 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 FBXL6Q8N531 539 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 SMG7Q92540 1137 aaKnown RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 RAD54LQ92698 747 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 CALML4Q96GE6 196 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 DDX27Q96GQ7 796 aaKnown RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 EPSTI1Q96J88 318 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 UROC1Q96N76 676 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 ACAP3Q96P50 834 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 TOPORSQ9NS56 1045 aaPredicted RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 ZDHHC7Q9NXF8 308 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 LARSQ9P2J5 1176 aaKnown RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 DPP7Q9UHL4 492 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 FBXO2Q9UK22 296 aaPredicted RBP13.53□□□□□ -0.24
MSH5-209ENST00000450148 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
MSH5-209ENST00000450148 SPDYE4A6NLX3 237 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 I3L4J1 428 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 FAM189A1O60320 539 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 PIGRP01833 764 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 HARSP12081 509 aaKnown RBP13.52□□□□□ -0.25
MSH5-209ENST00000450148 TKTP29401 623 aaKnown RBP13.52□□□□□ -0.25
MSH5-209ENST00000450148 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
MSH5-209ENST00000450148 STRN3Q13033 797 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 MTMR3Q13615 1198 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 RAB33AQ14088 237 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 DHX8Q14562 1220 aaKnown RBP13.52□□□□□ -0.25
MSH5-209ENST00000450148 NOLC1Q14978 699 aaKnown RBP eCLIP13.52□□□□□ -0.25
MSH5-209ENST00000450148 SPECC1Q5M775 1068 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 IER5LQ5T953 404 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 OTOP3Q7RTS5 596 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 C18orf25Q96B23 403 aaPredicted RBP13.52□□□□□ -0.25
MSH5-209ENST00000450148 MYADMQ96S97 322 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 TCHPQ9BT92 498 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 PRKD2Q9BZL6 878 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 ANKFY1Q9P2R3 1169 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 MORC2Q9Y6X9 1032 aaPredicted RBP13.52□□□□□ -0.25
MSH5-209ENST00000450148 CLUHO75153 1309 aa13.52□□□□□ -0.25
MSH5-209ENST00000450148 K7ELQ4 463 aaPredicted RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 PODXLO00592 558 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 TBC1D4O60343 1298 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 MARCKSP29966 332 aaPredicted RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 DDIT3P35638 169 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 TNFSF9P41273 254 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 VCPP55072 806 aaKnown RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 SLC39A4Q6P5W5 647 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 ELMSAN1Q6PJG2 1045 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 LARP4BQ92615 738 aaKnown RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 ACSF2Q96CM8 615 aaPredicted RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 CLIC6Q96NY7 704 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 SLC38A7Q9NVC3 462 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 TBX20Q9UMR3 447 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 SRPRBQ9Y5M8 271 aaKnown RBP13.51□□□□□ -0.25
MSH5-209ENST00000450148 BACE2Q9Y5Z0 518 aa13.51□□□□□ -0.25
MSH5-209ENST00000450148 TTC26A0AVF1 554 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 H0YCG3 227 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 CLDN3O15551 220 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 TRAK2O60296 914 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 FAM13AO94988 1023 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 ADRB2P07550 413 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 CXCL8P10145 99 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 HOXA9P31269 272 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
MSH5-209ENST00000450148 OR1D2P34982 312 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 GTF2BQ00403 316 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 MRPL58Q14197 206 aaKnown RBP13.5□□□□□ -0.25
MSH5-209ENST00000450148 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 PDXDC1Q6P996 788 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 MYCT1Q8N699 235 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 USP28Q96RU2 1077 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 KCNK12Q9HB15 430 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 PARVGQ9HBI0 331 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 EPS15L1Q9UBC2 864 aa13.5□□□□□ -0.25
MSH5-209ENST00000450148 SCN1AP35498 2009 aa13.49□□□□□ -0.25
MSH5-209ENST00000450148 K7ENM7 598 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms