RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ABLIM1O14639 778 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 RFPL2O75678 378 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 SCP2P22307 547 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 MTMR3Q13615 1198 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 PTPAQ15257 358 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 UPP1Q16831 310 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 XKR4Q5GH76 650 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 FAM173BQ6P4H8 233 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 LILRA6Q6PI73 481 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 ALKAL1Q6UXT8 129 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 BMP8AQ7Z5Y6 402 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 SUGP1Q8IWZ8 645 aaKnown RBP16.7■□□□□ 0.26
CHD3-205ENST00000449744 KREMEN2Q8NCW0 462 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 FEZF2Q8TBJ5 459 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 STAMQ92783 540 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 ZDHHC7Q9NXF8 308 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 LIMD1Q9UGP4 676 aa16.7■□□□□ 0.26
CHD3-205ENST00000449744 SRPRBQ9Y5M8 271 aaKnown RBP16.7■□□□□ 0.26
CHD3-205ENST00000449744 TRAK2O60296 914 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 KCNE1P15382 129 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 DDIT3P35638 169 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 LIG4P49917 911 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 MCL1Q07820 350 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 SEZ6Q53EL9 994 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 SPECC1Q5M775 1068 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 LIN9Q5TKA1 542 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 UBALD2Q8IYN6 164 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
CHD3-205ENST00000449744 LRRC15Q8TF66 581 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 EPSTI1Q96J88 318 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 ZMAT2Q96NC0 199 aaKnown RBP16.69■□□□□ 0.26
CHD3-205ENST00000449744 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 RHOBTB2Q9BYZ6 727 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 ZSCAN16Q9H4T2 348 aaPredicted RBP16.69■□□□□ 0.26
CHD3-205ENST00000449744 CNTN3Q9P232 1028 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 FBXO2Q9UK22 296 aaPredicted RBP16.69■□□□□ 0.26
CHD3-205ENST00000449744 MTMR6Q9Y217 621 aa16.69■□□□□ 0.26
CHD3-205ENST00000449744 PODXLO00592 558 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 HNRNPDLO14979 420 aaKnown RBP16.68■□□□□ 0.26
CHD3-205ENST00000449744 STX6O43752 255 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 ZMYND10O75800 440 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 ASGR2P07307 311 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 FGFR3P22607 806 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 ABCD1P33897 745 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 BRCC3P46736 316 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 ZNF131P52739 623 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 SOX4Q06945 474 aaPredicted RBP16.68■□□□□ 0.26
CHD3-205ENST00000449744 PRKD2Q9BZL6 878 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 WDR6Q9NNW5 1121 aaKnown RBP16.68■□□□□ 0.26
CHD3-205ENST00000449744 STK17AQ9UEE5 414 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 TBX20Q9UMR3 447 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 CLUHO75153 1309 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 TRIP11Q15643 1979 aa16.68■□□□□ 0.26
CHD3-205ENST00000449744 PIEZO1Q92508 2521 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 TECTAO75443 2155 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 CLTAP09496 248 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 GBP2P32456 591 aaPredicted RBP16.67■□□□□ 0.26
CHD3-205ENST00000449744 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
CHD3-205ENST00000449744 OR1D2P34982 312 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 KYAT1Q16773 422 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 SLC10A6Q3KNW5 377 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 PPM1LQ5SGD2 360 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 RRAGBQ5VZM2 374 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 ANKS3Q6ZW76 656 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 USP49Q70CQ1 688 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 ALYREFQ86V81 257 aaKnown RBP16.67■□□□□ 0.26
CHD3-205ENST00000449744 C3orf58Q8NDZ4 430 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 KCNN1Q92952 543 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 PLEKHA5Q9HAU0 1116 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 FBXW11Q9UKB1 542 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 DENND4AQ7Z401 1863 aa16.67■□□□□ 0.26
CHD3-205ENST00000449744 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 I3L4J1 428 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 CITO14578 2027 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 C8AP07357 584 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 HSP90AA1P07900 732 aaKnown RBP16.66■□□□□ 0.26
CHD3-205ENST00000449744 CXCL8P10145 99 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 IGFBP6P24592 240 aaPredicted RBP16.66■□□□□ 0.26
CHD3-205ENST00000449744 TKTP29401 623 aaKnown RBP16.66■□□□□ 0.26
CHD3-205ENST00000449744 PPP2R3AQ06190 1150 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 RAB33AQ14088 237 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 CD300LGQ6UXG3 332 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 HSCBQ8IWL3 235 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 FBXL6Q8N531 539 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 SNX21Q969T3 373 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 C18orf25Q96B23 403 aaPredicted RBP16.66■□□□□ 0.26
CHD3-205ENST00000449744 ZNF707Q96C28 371 aaPredicted RBP16.66■□□□□ 0.26
CHD3-205ENST00000449744 ASIC4Q96FT7 647 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 USP28Q96RU2 1077 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 KCNH6Q9H252 994 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 BACE2Q9Y5Z0 518 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 CDY1Q9Y6F8 540 aa16.66■□□□□ 0.26
CHD3-205ENST00000449744 MTCL1Q9Y4B5 1905 aaKnown RBP16.66■□□□□ 0.26
CHD3-205ENST00000449744 C5orf42Q9H799 3197 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 ADAM12O43184 909 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 PIGRP01833 764 aa16.65■□□□□ 0.26
CHD3-205ENST00000449744 HNRNPA1P09651 372 aaKnown RBP eCLIP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms