RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNF-208ENST00000449264 C1orf112Q9NSG2 853 aa15.83■□□□□ 0.12
TNF-208ENST00000449264 ZNF623O75123 536 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 TNNC2P02585 160 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 SYN1P17600 705 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 GTF2H1P32780 548 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 PBX1P40424 430 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 CETN1Q12798 172 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 EXOC3L4Q17RC7 722 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 DUOXA2Q1HG44 320 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 SPECC1LQ69YQ0 1117 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 GBP6Q6ZN66 633 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 AGMOQ6ZNB7 445 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.82■□□□□ 0.12
TNF-208ENST00000449264 MRPL10Q7Z7H8 261 aaKnown RBP15.82■□□□□ 0.12
TNF-208ENST00000449264 CD302Q8IX05 232 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 TMEM130Q8N3G9 435 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 ERGIC2Q96RQ1 377 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 RPS6KC1Q96S38 1066 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 GAD1Q99259 594 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 LSM14BQ9BX40 385 aaKnown RBP15.82■□□□□ 0.12
TNF-208ENST00000449264 RSAD1Q9HA92 442 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 CNTN3Q9P232 1028 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 TTC3P53804 2025 aa15.82■□□□□ 0.12
TNF-208ENST00000449264 A0A1W2PQC6 194 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 ENPP3O14638 875 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 PHACTR2O75167 634 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 ACRP10323 421 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 PIK3CAP42336 1068 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 MCCD1P59942 119 aaPredicted RBP15.81■□□□□ 0.12
TNF-208ENST00000449264 KCNMA1Q12791 1236 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 ZACNQ401N2 412 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 TAS1R2Q8TE23 839 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 DPF3Q92784 378 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 BADQ92934 168 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 VWCEQ96DN2 955 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 ZMAT2Q96NC0 199 aaKnown RBP15.81■□□□□ 0.12
TNF-208ENST00000449264 FAM207AQ9NSI2 230 aaPredicted RBP15.81■□□□□ 0.12
TNF-208ENST00000449264 ZMYND8Q9ULU4 1186 aaPredicted RBP15.81■□□□□ 0.12
TNF-208ENST00000449264 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 SIK3Q9Y2K2 1263 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 GIT1Q9Y2X7 761 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 C2CD2Q9Y426 696 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 CEP290O15078 2479 aa15.81■□□□□ 0.12
TNF-208ENST00000449264 GTPBP10A4D1E9 387 aaKnown RBP15.8■□□□□ 0.12
TNF-208ENST00000449264 ARL5CA6NH57 179 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 P4HA2O15460 535 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 C4BPAP04003 597 aaKnown RBP15.8■□□□□ 0.12
TNF-208ENST00000449264 SLC9A1P19634 815 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 GUCY2FP51841 1108 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 AP3M2P53677 418 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 APBA1Q02410 837 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 IKBKEQ14164 716 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 ALKAL1Q6UXT8 129 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 C15orf39Q6ZRI6 1047 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 ZNF598Q86UK7 904 aaKnown RBP15.8■□□□□ 0.12
TNF-208ENST00000449264 FBXL13Q8NEE6 735 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 CACTINQ8WUQ7 758 aaKnown RBP15.8■□□□□ 0.12
TNF-208ENST00000449264 INTS2Q9H0H0 1204 aaKnown RBP15.8■□□□□ 0.12
TNF-208ENST00000449264 TUBGCP4Q9UGJ1 667 aa15.8■□□□□ 0.12
TNF-208ENST00000449264 SMIM28A0A1B0GU29 152 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.79■□□□□ 0.12
TNF-208ENST00000449264 PTGESO14684 152 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 LRRN2O75325 713 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 HLA-DRAP01903 254 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 KRT19P08727 400 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 ACTN1P12814 892 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 TRIM21P19474 475 aaKnown RBP15.79■□□□□ 0.12
TNF-208ENST00000449264 SCNN1GP51170 649 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 AFF1P51825 1210 aaKnown RBP15.79■□□□□ 0.12
TNF-208ENST00000449264 LRMPQ12912 555 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 EPC2Q52LR7 807 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 TRAPPC11Q7Z392 1133 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 RPUSD2Q8IZ73 545 aaKnown RBP15.79■□□□□ 0.12
TNF-208ENST00000449264 SEMA4DQ92854 862 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 C18orf25Q96B23 403 aaPredicted RBP15.79■□□□□ 0.12
TNF-208ENST00000449264 ELMO3Q96BJ8 720 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 LRFN2Q9ULH4 789 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 PLAGL2Q9UPG8 496 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 ITIH6Q6UXX5 1313 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 VNN1O95497 513 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 EOMESO95936 686 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 ITGB3P05106 788 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 FGFR1P11362 822 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 KCNE1P15382 129 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 PON1P27169 355 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 FPGSQ05932 587 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 CCDC173Q0VFZ6 552 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 TRPC3Q13507 836 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 NCOA4Q13772 614 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 XKR4Q5GH76 650 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 TRIM65Q6PJ69 517 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 NT5DC4Q86YG4 428 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 C1orf127Q8N9H9 656 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 NEK11Q8NG66 645 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 HELQQ8TDG4 1101 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 PI4K2AQ9BTU6 479 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 IL23AQ9NPF7 189 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 UBN1Q9NPG3 1134 aa15.79■□□□□ 0.12
TNF-208ENST00000449264 RAB20Q9NX57 234 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms