RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 ZBTB45Q96K62 511 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 NLRP4Q96MN2 994 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 SYT11Q9BT88 431 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 IMPG2Q9BZV3 1241 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 INO80BQ9C086 356 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 SNX12Q9UMY4 172 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 V9GYY5 206 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 LILRB3O75022 631 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 C4BPAP04003 597 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TBXAS1P24557 533 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 USP8P40818 1118 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PIK3CAP42336 1068 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PDE6CP51160 858 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 CLCN3P51790 818 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 IGBP1P78318 339 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 RBM10P98175 930 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PPFIA1Q13136 1202 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TEX35Q5T0J7 233 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 OLFML2BQ68BL8 750 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 GLYCTKQ8IVS8 523 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 LINC01465Q8N7H1 131 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 LNX1Q8TBB1 728 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 HELQQ8TDG4 1101 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TRAPPC12Q8WVT3 735 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 CTNNBL1Q8WYA6 563 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PDE11AQ9HCR9 933 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TOPORSQ9NS56 1045 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TNFSF13BQ9Y275 285 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 Q9Y3F1 56 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
VIPAS39-203ENST00000448935 PASKQ96RG2 1323 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 CNTNAP2Q9UHC6 1331 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 ANKRD62A6NC57 917 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 BUB1O43683 1085 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 PHACTR2O75167 634 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 GABBR2O75899 941 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 IL18RAPO95256 599 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 HLA-DRAP01903 254 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF286BP0CG31 522 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 PNMA6AP0CW24 399 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 GZMAP12544 262 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 PROZP22891 400 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 NOP2P46087 812 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 MBTD1Q05BQ5 628 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 NAA30Q147X3 362 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 GRIK4Q16099 956 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF568Q3ZCX4 644 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 MTHFD1LQ6UB35 978 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 CAGE1Q8TC20 777 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 USP6NLQ92738 828 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 KREMEN1Q96MU8 473 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 APBA2Q99767 749 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 HAPLN2Q9GZV7 340 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 SEPT11Q9NVA2 429 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 PUF60Q9UHX1 559 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 SALL4Q9UJQ4 1053 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 CPSF3Q9UKF6 684 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 AKT3Q9Y243 479 aa11.37□□□□□ -0.59
VIPAS39-203ENST00000448935 NCANO14594 1321 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 RTN2O75298 545 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 PALMO75781 387 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 EDN1P05305 212 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 HARSP12081 509 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 PAFAH1B1P43034 410 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 CPT1AP50416 773 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 GALCP54803 685 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 ITIH3Q06033 890 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 CCDC70Q6NSX1 233 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 PPP1R2P3Q6NXS1 205 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 APBB1IPQ7Z5R6 666 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 ZBTB33Q86T24 672 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF410Q86VK4 478 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF677Q86XU0 584 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 RHOT2Q8IXI1 618 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 LRRN4CLQ8ND94 238 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 RFFLQ8WZ73 363 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 ZNF516Q92618 1163 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 TAF4BQ92750 862 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 PACSIN1Q9BY11 444 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 PTPRHQ9HD43 1115 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 GNEQ9Y223 722 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 NRCAMQ92823 1304 aa11.36□□□□□ -0.59
VIPAS39-203ENST00000448935 CES2O00748 559 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 TNPO2O14787 897 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 DYNC1LI2O43237 492 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 FAM189A1O60320 539 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 MCF2P10911 925 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 PCBP1Q15365 356 aaKnown RBP eCLIP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 DUOXA2Q1HG44 320 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 MEI1Q5TIA1 1274 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 EPS8L1Q8TE68 723 aa11.35□□□□□ -0.59
VIPAS39-203ENST00000448935 OSBPL9Q96SU4 736 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms