RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 CPVLQ9H3G5 476 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 DNAJC18Q9H819 358 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 PCDH18Q9HCL0 1135 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 DDX18Q9NVP1 670 aaKnown RBP10□□□□□ -0.81
SYNPO2-204ENST00000448416 CAMTA1Q9Y6Y1 1673 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 EXOC1LA0A1B0GW35 172 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 WDR91A4D1P6 747 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 CYP2D6P10635 497 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 ADCY8P40145 1251 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 GRIA2P42262 883 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 GALK1P51570 392 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 MAP3K10Q02779 954 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 DRAP1Q14919 205 aaPredicted RBP10□□□□□ -0.81
SYNPO2-204ENST00000448416 SLC1A5Q15758 541 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 ECM1Q16610 540 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 SGO2Q562F6 1265 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 DUS1LQ6P1R4 473 aaKnown RBP10□□□□□ -0.81
SYNPO2-204ENST00000448416 SCUBE1Q8IWY4 988 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 RFWD2Q8NHY2 731 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 CYLDQ9NQC7 956 aa10□□□□□ -0.81
SYNPO2-204ENST00000448416 SMG5Q9UPR3 1016 aaKnown RBP10□□□□□ -0.81
SYNPO2-204ENST00000448416 ZMYM2Q9UBW7 1377 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 SPOPO43791 374 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 CIB2O75838 187 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ATF2P15336 505 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ITGA9Q13797 1035 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 SEPT7Q16181 437 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 C11orf63Q6NUN7 778 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 B3GNT6Q6ZMB0 384 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 GPBP1Q86WP2 473 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 REXO1Q8N1G1 1221 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 SLX1AQ9BQ83 275 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 LZTS2Q9BRK4 669 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ZNF711Q9Y462 761 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PRPF4O43172 522 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 SLC37A4O43826 429 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 USP1O94782 785 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 TDP2O95551 362 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 LVRNQ6Q4G3 990 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ZC3H3Q8IXZ2 948 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 WNT8AQ9H1J5 351 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 TUBGCP4Q9UGJ1 667 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 DNAJC12Q9UKB3 198 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PCDHA2Q9Y5H9 948 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 DLEC1Q9Y238 1755 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 E9PMD0 336 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 F8W8V4 182 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 AKAP3O75969 853 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PGM3O95394 542 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 CPA2P48052 419 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ARFIP2P53365 341 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PLOD1Q02809 727 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 CAV1Q03135 178 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ORC2Q13416 577 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 LRRC36Q1X8D7 754 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 CEP70Q8NHQ1 597 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 MRRFQ96E11 262 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 TRAIPQ9BWF2 469 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 TRIM55Q9BYV6 548 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 LRRC19Q9H756 370 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 VAT1LQ9HCJ6 419 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 CHORDC1Q9UHD1 332 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 BARX2Q9UMQ3 279 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 RGPD5Q99666 1765 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 FUT4P22083 530 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PIK3CAP42336 1068 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PKN2Q16513 984 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 LRRC6Q86X45 466 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 DGKHQ86XP1 1220 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 CCDC110Q8TBZ0 833 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 OSBPL8Q9BZF1 889 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 FBXO6Q9NRD1 293 aaPredicted RBP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 BTBD7Q9P203 1132 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 NIP7Q9Y221 180 aaKnown RBP eCLIP9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 TRAF3IP3Q9Y228 551 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
SYNPO2-204ENST00000448416 ASPHQ12797 758 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 SIX1Q15475 284 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 CHRNA2Q15822 529 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 SMYD1Q8NB12 490 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 OLIG1Q8TAK6 271 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 TTC25Q96NG3 672 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 STK33Q9BYT3 514 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 B2RBV5 119 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 KLRF2D3W0D1 207 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 TXNDC9O14530 226 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 MAGEB3O15480 346 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 CLDN3O15551 220 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 ZNF862O60290 1169 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 FTLP02792 175 aaPredicted RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 FGFR1P11362 822 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
SYNPO2-204ENST00000448416 OR6Y1Q8NGX8 325 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms