RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 BRCC3P46736 316 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 HTR4Q13639 388 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 UPP1Q16831 310 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 RSPO2Q6UXX9 243 aaPredicted RBP31.04■■■□□ 2.56
CBX4-202ENST00000448310 C1orf186Q6ZWK4 172 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 SLC7A14Q8TBB6 771 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 CCDC94Q9BW85 323 aaPredicted RBP31.04■■■□□ 2.56
CBX4-202ENST00000448310 MRPL4Q9BYD3 311 aaKnown RBP31.04■■■□□ 2.56
CBX4-202ENST00000448310 TMEM134Q9H6X4 195 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 MTRRQ9UBK8 725 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 NUMBLQ9Y6R0 609 aa31.04■■■□□ 2.56
CBX4-202ENST00000448310 SFI1A8K8P3 1242 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 ANHXE9PGG2 379 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 YARSP54577 528 aaKnown RBP31.03■■■□□ 2.56
CBX4-202ENST00000448310 RAB33AQ14088 237 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 CCDC105Q8IYK2 499 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 GPR152Q8TDT2 470 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 DRC1Q96MC2 740 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 UROC1Q96N76 676 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 RTP3Q9BQQ7 232 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 CDY1Q9Y6F8 540 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 DMDP11532 3685 aa31.03■■■□□ 2.56
CBX4-202ENST00000448310 PROB1E7EW31 1015 aa31.02■■■□□ 2.56
CBX4-202ENST00000448310 SLC16A4O15374 487 aa31.02■■■□□ 2.56
CBX4-202ENST00000448310 RAD51AP2Q09MP3 1159 aa31.02■■■□□ 2.56
CBX4-202ENST00000448310 AXDND1Q5T1B0 1012 aaPredicted RBP31.02■■■□□ 2.56
CBX4-202ENST00000448310 DDX27Q96GQ7 796 aaKnown RBP31.02■■■□□ 2.56
CBX4-202ENST00000448310 ZMAT2Q96NC0 199 aaKnown RBP31.02■■■□□ 2.56
CBX4-202ENST00000448310 RPP25Q9BUL9 199 aaKnown RBP31.02■■■□□ 2.56
CBX4-202ENST00000448310 TOPORSQ9NS56 1045 aaPredicted RBP31.02■■■□□ 2.56
CBX4-202ENST00000448310 PDCD11Q14690 1871 aaKnown RBP31.01■■■□□ 2.56
CBX4-202ENST00000448310 HARSP12081 509 aaKnown RBP31.01■■■□□ 2.55
CBX4-202ENST00000448310 RFX1P22670 979 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 NBL1P41271 181 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 ALKAL1Q6UXT8 129 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 ASCL5Q7RTU5 278 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 DTWD2Q8NBA8 298 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 PLIN2Q99541 437 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 TCHPQ9BT92 498 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 HCFC1R1Q9NWW0 138 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 CDH7Q9ULB5 785 aa31.01■■■□□ 2.55
CBX4-202ENST00000448310 ABLIM1O14639 778 aa31■■■□□ 2.55
CBX4-202ENST00000448310 HOXA9P31269 272 aa31■■■□□ 2.55
CBX4-202ENST00000448310 RABEP1Q15276 862 aa31■■■□□ 2.55
CBX4-202ENST00000448310 XKR4Q5GH76 650 aa31■■■□□ 2.55
CBX4-202ENST00000448310 PARM1Q6UWI2 310 aa31■■■□□ 2.55
CBX4-202ENST00000448310 FRMD5Q7Z6J6 570 aa31■■■□□ 2.55
CBX4-202ENST00000448310 ITFG1Q8TB96 612 aa31■■■□□ 2.55
CBX4-202ENST00000448310 FGF14Q92915 247 aa31■■■□□ 2.55
CBX4-202ENST00000448310 ZBTB45Q96K62 511 aaPredicted RBP31■■■□□ 2.55
CBX4-202ENST00000448310 SNX27Q96L92 541 aa31■■■□□ 2.55
CBX4-202ENST00000448310 PNMA5Q96PV4 448 aa31■■■□□ 2.55
CBX4-202ENST00000448310 TBC1D17Q9HA65 648 aa31■■■□□ 2.55
CBX4-202ENST00000448310 DAXXQ9UER7 740 aaPredicted RBP31■■■□□ 2.55
CBX4-202ENST00000448310 PTPRZ1P23471 2315 aaPredicted RBP30.99■■■□□ 2.55
CBX4-202ENST00000448310 RIF1Q5UIP0 2472 aaKnown RBP30.99■■■□□ 2.55
CBX4-202ENST00000448310 XYLBO75191 536 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 PROZP22891 400 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 ATP2C1P98194 919 aaPredicted RBP30.99■■■□□ 2.55
CBX4-202ENST00000448310 RILPL1Q5EBL4 403 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 FGF13Q92913 245 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 KIF3AQ9Y496 699 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 RBM19Q9Y4C8 960 aaKnown RBP30.99■■■□□ 2.55
CBX4-202ENST00000448310 CFAP54Q96N23 3096 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 VPS13AQ96RL7 3174 aa30.99■■■□□ 2.55
CBX4-202ENST00000448310 PODXLO00592 558 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 TRAPPC3O43617 180 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 MCF2P10911 925 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 MPZL3Q6UWV2 235 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 ANKS3Q6ZW76 656 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 ACAP3Q96P50 834 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 C17orf75Q9HAS0 396 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 BACE2Q9Y5Z0 518 aa30.98■■■□□ 2.55
CBX4-202ENST00000448310 ZFP37Q9Y6Q3 630 aaPredicted RBP30.98■■■□□ 2.55
CBX4-202ENST00000448310 MEFVO15553 781 aaPredicted RBP30.97■■■□□ 2.55
CBX4-202ENST00000448310 GUCY2CP25092 1073 aa30.97■■■□□ 2.55
CBX4-202ENST00000448310 ANGPT1Q15389 498 aa30.97■■■□□ 2.55
CBX4-202ENST00000448310 C18orf25Q96B23 403 aaPredicted RBP30.97■■■□□ 2.55
CBX4-202ENST00000448310 TMX3Q96JJ7 454 aa30.97■■■□□ 2.55
CBX4-202ENST00000448310 ARHGEF3Q9NR81 526 aa30.97■■■□□ 2.55
CBX4-202ENST00000448310 SLC38A7Q9NVC3 462 aa30.97■■■□□ 2.55
CBX4-202ENST00000448310 ANKFY1Q9P2R3 1169 aa30.97■■■□□ 2.55
CBX4-202ENST00000448310 DNMT3BQ9UBC3 853 aaKnown RBP30.97■■■□□ 2.55
CBX4-202ENST00000448310 VWA3AA6NCI4 1184 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 PRR23AA6NEV1 266 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 CD2BP2O95400 341 aaKnown RBP30.96■■■□□ 2.55
CBX4-202ENST00000448310 UVSSAQ2YD98 709 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 SEZ6Q53EL9 994 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 HYIQ5T013 277 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 SLC2A4RGQ9NR83 387 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 FAM186AA6NE01 2351 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 COL4A3Q01955 1670 aa30.96■■■□□ 2.55
CBX4-202ENST00000448310 KCNE1P15382 129 aa30.95■■■□□ 2.55
CBX4-202ENST00000448310 GJB2P29033 226 aa30.95■■■□□ 2.55
CBX4-202ENST00000448310 GPC5P78333 572 aa30.95■■■□□ 2.55
CBX4-202ENST00000448310 CACNB1Q02641 598 aaPredicted RBP30.95■■■□□ 2.55
CBX4-202ENST00000448310 VARS2Q5ST30 1063 aaKnown RBP30.95■■■□□ 2.55
CBX4-202ENST00000448310 NTPCRQ9BSD7 190 aaKnown RBP30.95■■■□□ 2.55
CBX4-202ENST00000448310 TIPINQ9BVW5 301 aa30.95■■■□□ 2.55
CBX4-202ENST00000448310 CNTN3Q9P232 1028 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms