RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TUBA1BP68363 451 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 CNGA2Q16280 664 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 MAN2A1Q16706 1144 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 NT5DC1Q5TFE4 455 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 IRGCQ6NXR0 463 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 SCYL2Q6P3W7 929 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 TUBA1AQ71U36 451 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 ZNF804AQ7Z570 1209 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 ZCCHC7Q8N3Z6 543 aaKnown RBP9.71□□□□□ -0.85
SMC6-207ENST00000448223 ATP8B4Q8TF62 1192 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 SEPT1Q8WYJ6 367 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 MPP6Q9NZW5 540 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 FBXO9Q9UK97 447 aaPredicted RBP9.71□□□□□ -0.85
SMC6-207ENST00000448223 NOC2LQ9Y3T9 749 aaKnown RBP9.71□□□□□ -0.85
SMC6-207ENST00000448223 CAPN6Q9Y6Q1 641 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 CDHR2Q9BYE9 1310 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 NPHP3-ACAD11A0A0J9YXS1 232 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 CCDC189A1A4V9 331 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 ARHGEF35A5YM69 484 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 SNPHO15079 494 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 RFC5P40937 340 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 OTUD4Q01804 1114 aaKnown RBP9.71□□□□□ -0.85
SMC6-207ENST00000448223 SEC23AQ15436 765 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 DOK7Q18PE1 504 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 KLHL38Q2WGJ6 581 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 WLSQ5T9L3 541 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 TBC1D9BQ66K14 1250 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 CLEC4GQ6UXB4 293 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 SLC51AQ86UW1 340 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 ADSSL1Q8N142 457 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 DEPDC1BQ8WUY9 529 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 B3GALT6Q96L58 329 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 FAM153AQ9UHL3 310 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 ATP6V1HQ9UI12 483 aa9.71□□□□□ -0.85
SMC6-207ENST00000448223 KPNA7A9QM74 516 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 TBC1D4O60343 1298 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 CHEK2O96017 543 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 ITPK1Q13572 414 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 ARMCX4Q5H9R4 360 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 FAM26FQ5R3K3 315 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 LMBRD2Q68DH5 695 aaPredicted RBP9.71□□□□□ -0.86
SMC6-207ENST00000448223 TUBA3EQ6PEY2 450 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 SPICE1Q8N0Z3 855 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 NSUN4Q96CB9 384 aaKnown RBP9.71□□□□□ -0.86
SMC6-207ENST00000448223 SLC10A4Q96EP9 437 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 KDM4CQ9H3R0 1056 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 UBN1Q9NPG3 1134 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 CYLDQ9NQC7 956 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 ATP8A2Q9NTI2 1148 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 PANK4Q9NVE7 773 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 CNTNAP5Q8WYK1 1306 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 C1orf232A0A0U1RR37 186 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 PFDN6O15212 129 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 PPIP5K2O43314 1243 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 CBFA2T3O75081 653 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 ALDH18A1P54886 795 aaKnown RBP9.71□□□□□ -0.86
SMC6-207ENST00000448223 DMC1Q14565 340 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 CCDC142Q17RM4 750 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 PDZD4Q76G19 769 aaPredicted RBP9.71□□□□□ -0.86
SMC6-207ENST00000448223 ZNF786Q8N393 782 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 STX19Q8N4C7 294 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 ARL8AQ96BM9 186 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 PITPNM2Q9BZ72 1349 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 DMAP1Q9NPF5 467 aaPredicted RBP9.71□□□□□ -0.86
SMC6-207ENST00000448223 SENP1Q9P0U3 644 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 LIMA1Q9UHB6 759 aaKnown RBP9.71□□□□□ -0.86
SMC6-207ENST00000448223 LAMA4Q16363 1823 aa9.71□□□□□ -0.86
SMC6-207ENST00000448223 UBE4BO95155 1302 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 FAM25AB3EWG3 89 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 FAM25CB3EWG5 89 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 FAM25GB3EWG6 89 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L15C9J2P7 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L13C9JLJ4 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L11C9JVI0 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L18D6R9N7 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L22D6RA61 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L17D6RBQ6 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L19D6RCP7 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L20D6RJB6 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 TOM1O60784 492 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 SLURP2P0DP57 97 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 ATP2B4P23634 1241 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 RGS2P41220 211 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 TUBA4AP68366 448 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L24Q0WX57 530 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 USP17L6PQ6QN14 398 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 ELOA2Q8IYF1 753 aaPredicted RBP9.7□□□□□ -0.86
SMC6-207ENST00000448223 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 CSRNP1Q96S65 589 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 UBE2OQ9C0C9 1292 aaKnown RBP9.7□□□□□ -0.86
SMC6-207ENST00000448223 EXOSC4Q9NPD3 245 aaKnown RBP9.7□□□□□ -0.86
SMC6-207ENST00000448223 CCNL1Q9UK58 526 aaPredicted RBP9.7□□□□□ -0.86
SMC6-207ENST00000448223 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
SMC6-207ENST00000448223 SPATA2Q9UM82 520 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 RCCD1A6NED2 376 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 ERVV-1B6SEH8 477 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 LPXNO60711 386 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 PSMC3P17980 439 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 RPS6KA3P51812 740 aa9.7□□□□□ -0.86
SMC6-207ENST00000448223 CBX3Q13185 183 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms