RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 PCDHB13Q9Y5F0 798 aa27.26■■□□□ 1.95
UFD1-204ENST00000447868 GRXCR2A6NFK2 248 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 KCNE1P15382 129 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 CLCNKBP51801 687 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 KCNC3Q14003 757 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 KYAT1Q16773 422 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 GRAMD1CQ8IYS0 662 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 C18orf25Q96B23 403 aaPredicted RBP27.25■■□□□ 1.95
UFD1-204ENST00000447868 MSLNLQ96KJ4 702 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 EMILIN2Q9BXX0 1053 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 EXOC7Q9UPT5 735 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 HCFC2Q9Y5Z7 792 aa27.25■■□□□ 1.95
UFD1-204ENST00000447868 SF3B1O75533 1304 aaKnown RBP eCLIP27.24■■□□□ 1.951e-6■■■■■ 75.7
UFD1-204ENST00000447868 FAM189A1O60320 539 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 SPAG1Q07617 926 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 USP41Q3LFD5 358 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 SLFN12LQ6IEE8 588 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 UROC1Q96N76 676 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 KLHL5Q96PQ7 755 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 SSX2IPQ9Y2D8 614 aa27.24■■□□□ 1.95
UFD1-204ENST00000447868 PDCD11Q14690 1871 aaKnown RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 ACTN4O43707 911 aaKnown RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 LILRB3O75022 631 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 PRPF6O94906 941 aaKnown RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 CNPP09543 421 aaKnown RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 SLFN14P0C7P3 912 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 IGFBP6P24592 240 aaPredicted RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 KLRC2P26717 231 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 DSG1Q02413 1049 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 ALCAMQ13740 583 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 ENOX2Q16206 610 aaKnown RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 UPP1Q16831 310 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 KIAA0319Q5VV43 1072 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 CNNM4Q6P4Q7 775 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 DCLRE1AQ6PJP8 1040 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 TMEM184AQ6ZMB5 413 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 SYCP3Q8IZU3 236 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 CASP10Q92851 521 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 FAM212AQ96EL1 285 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 RPF1Q9H9Y2 349 aaKnown RBP27.23■■□□□ 1.95
UFD1-204ENST00000447868 PLEKHA5Q9HAU0 1116 aa27.23■■□□□ 1.95
UFD1-204ENST00000447868 MBTPS2O43462 519 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 B3GAT3O94766 335 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 ACOT2P49753 483 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 PPP2R3AQ06190 1150 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 SMAD4Q13485 552 aaKnown RBP27.22■■□□□ 1.95
UFD1-204ENST00000447868 CUL4BQ13620 913 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 FAM171A1Q5VUB5 890 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 ANKRD54Q6NXT1 300 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 CEP57Q86XR8 500 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 GLIS3Q8NEA6 775 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 RIN2Q8WYP3 895 aaPredicted RBP27.22■■□□□ 1.95
UFD1-204ENST00000447868 POMGNT1Q8WZA1 660 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 APOL5Q9BWW9 433 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 CHST7Q9NS84 486 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 AGO2Q9UKV8 859 aaKnown RBP27.22■■□□□ 1.95
UFD1-204ENST00000447868 FAM50BQ9Y247 325 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 HPSEQ9Y251 543 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 STYXL1Q9Y6J8 313 aa27.22■■□□□ 1.95
UFD1-204ENST00000447868 TTC26A0AVF1 554 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 LACTBL1A8MY62 500 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 PODXLO00592 558 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 EPCAMP16422 314 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 NDUFA8P51970 172 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 UNC13DQ70J99 1090 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 FSIP1Q8NA03 581 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 SMRP1Q8NCR6 262 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 KIF12Q96FN5 646 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 DDX27Q96GQ7 796 aaKnown RBP27.21■■□□□ 1.95
UFD1-204ENST00000447868 PAGE5Q96GU1 130 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 TUBGCP4Q9UGJ1 667 aa27.21■■□□□ 1.95
UFD1-204ENST00000447868 CPSF3Q9UKF6 684 aaKnown RBP27.21■■□□□ 1.95
UFD1-204ENST00000447868 ADSSP30520 456 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 SYKP43405 635 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 RTP2Q5QGT7 225 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 FAM26FQ5R3K3 315 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 STXBP4Q6ZWJ1 553 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 PPFIBP1Q86W92 1011 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 TMEM130Q8N3G9 435 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 C3orf58Q8NDZ4 430 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 SLC22A17Q8WUG5 538 aa27.2■■□□□ 1.94
UFD1-204ENST00000447868 A0A1W2PQ27 194 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 A0A1W2PQ64 194 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 A0A1W2PQD8 194 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 TMEM189-UBE2V1I3L0A0 370 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 TEX28O15482 410 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 ELAVL2Q12926 359 aaKnown RBP27.19■■□□□ 1.94
UFD1-204ENST00000447868 POSTNQ15063 836 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 PRSS55Q6UWB4 352 aaPredicted RBP27.19■■□□□ 1.94
UFD1-204ENST00000447868 CD300LGQ6UXG3 332 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 TTPALQ9BTX7 342 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 TMEM206Q9H813 350 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 USP25Q9UHP3 1055 aa27.19■■□□□ 1.94
UFD1-204ENST00000447868 I3L4J1 428 aa27.18■■□□□ 1.94
UFD1-204ENST00000447868 RPL17P18621 184 aaKnown RBP27.18■■□□□ 1.94
UFD1-204ENST00000447868 BRCC3P46736 316 aa27.18■■□□□ 1.94
UFD1-204ENST00000447868 CLCN4P51793 760 aa27.18■■□□□ 1.94
UFD1-204ENST00000447868 SYCE2Q6PIF2 218 aa27.18■■□□□ 1.94
UFD1-204ENST00000447868 GLYCTKQ8IVS8 523 aa27.18■■□□□ 1.94
UFD1-204ENST00000447868 GOLPH3LQ9H4A5 285 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms