RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 HNRNPH3P31942 346 aaKnown RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 HSD17B3P37058 310 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 SEC24CP53992 1094 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 COBLL1Q53SF7 1204 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 ZNF767PQ75MW2 155 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TBC1D16Q8TBP0 767 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 PPP4R1Q8TF05 950 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 PGBD4Q96DM1 585 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 SPOCK3Q9BQ16 436 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 OR51B5Q9H339 312 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 PHF11Q9UIL8 331 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TRMT6Q9UJA5 497 aaKnown RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 ZNF180Q9UJW8 692 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 NFU1Q9UMS0 254 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 SOS2Q07890 1332 aaPredicted RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 PZPP20742 1482 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 CFAP69A5D8W1 941 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TRIM64A6NGJ6 449 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TRIM64BA6NI03 449 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 GNAT3A8MTJ3 354 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 CFAP99D6REC4 459 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 GIPC1O14908 333 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 SKAP2O75563 359 aaPredicted RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 H2AFZP0C0S5 128 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 MAP4P27816 1152 aaKnown RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 BCAP31P51572 246 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 ILF2Q12905 390 aaKnown RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 CAMK1Q14012 370 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TRIP13Q15645 432 aaPredicted RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 GRAMD1BQ3KR37 738 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 KCTD21Q4G0X4 260 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 SCARA3Q6AZY7 606 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 H2AFVQ71UI9 128 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 USP37Q86T82 979 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 ARL10Q8N8L6 244 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TRUB1Q8WWH5 349 aaKnown RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 SGK3Q96BR1 496 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 OMA1Q96E52 524 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 BTBD10Q9BSF8 475 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 BRIP1Q9BX63 1249 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TEKT3Q9BXF9 490 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 TRPV6Q9H1D0 765 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 FOXP1Q9H334 677 aaPredicted RBP3.08□□□□□ -1.92
CHD9-203ENST00000447540 MARCH7Q9H992 704 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 MLXIPLQ9NP71 852 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 HESX1Q9UBX0 185 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 SNX8Q9Y5X2 465 aa3.08□□□□□ -1.92
CHD9-203ENST00000447540 LRRIQ4A6NIV6 560 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CLDN25C9JDP6 229 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PEX14O75381 377 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TTLL1O95922 423 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 C8BP07358 591 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PURAQ00577 322 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 EPHA7Q15375 998 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 MOGQ16653 247 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RABGAP1LQ5R372 815 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TRIM50Q86XT4 487 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PALB2Q86YC2 1186 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 SH3KBP1Q96B97 665 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TBATAQ96M53 351 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 GDF3Q9NR23 364 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 XPO7Q9UIA9 1087 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZBTB1Q9Y2K1 713 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 NCAPD2Q15021 1401 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 EFCAB10A6NFE3 127 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TAF4O00268 1085 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 N4BP1O75113 896 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 BAG2O95816 211 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CSB-PGBD3P0DP91 1061 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 HOXB1P14653 301 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 UQCRBP14927 111 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TCF3P15923 654 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RFX1P22670 979 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 PTGS2P35354 604 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RASA2Q15283 850 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 FXNQ16595 210 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ARL6IP4Q66PJ3 421 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 PCGF5Q86SE9 256 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 STX19Q8N4C7 294 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 SNX31Q8N9S9 440 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 NCOA7Q8NI08 942 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZNF333Q96JL9 665 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CNDP2Q96KP4 475 aaKnown RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 BBS4Q96RK4 519 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 C2orf49Q9BVC5 232 aaPredicted RBP3.07□□□□□ -1.92
CHD9-203ENST00000447540 VANGL2Q9ULK5 521 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TRIM33Q9UPN9 1127 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ERVK-11Q9UQG0 969 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZNF518AQ6AHZ1 1483 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 FRMPD4Q14CM0 1322 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ESYT2A0FGR8 921 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 TCEA3O75764 348 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ZNF3P17036 446 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 CTNNA2P26232 953 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RORAP35398 523 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 GP5P40197 560 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 RAB4BP61018 213 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 MAP3K10Q02779 954 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 ENPEPQ07075 957 aa3.07□□□□□ -1.92
CHD9-203ENST00000447540 FLOT2Q14254 428 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms