RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 GYPCP04921 128 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 NFICP08651 508 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 GSDMDP57764 484 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TMEM132DQ14C87 1099 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 SLC24A5Q71RS6 500 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TRAPPC11Q7Z392 1133 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 RTN4RL1Q86UN2 441 aaPredicted RBP10.29□□□□□ -0.76
NPHP1-207ENST00000445609 LMO3Q8TAP4 145 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TAS1R2Q8TE23 839 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 FAM84AQ96KN4 292 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TSPAN18Q96SJ8 248 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 MTMR12Q9C0I1 747 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 INTS2Q9H0H0 1204 aaKnown RBP10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TSPYL2Q9H2G4 693 aaPredicted RBP10.29□□□□□ -0.76
NPHP1-207ENST00000445609 PRDM5Q9NQX1 630 aaPredicted RBP10.29□□□□□ -0.76
NPHP1-207ENST00000445609 RAB20Q9NX57 234 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 KLK14Q9P0G3 267 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 CNTN3Q9P232 1028 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TRIM43BA6NCK2 446 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 EPHB6O15197 1021 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TIMP1P01033 207 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 ACTN1P12814 892 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 CASP14P31944 242 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 RFC2P35250 354 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 XKR4Q5GH76 650 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 KLHDC7AQ5VTJ3 777 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 DPY19L2P1Q6NXN4 242 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 SEMA4DQ92854 862 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TRIM43Q96BQ3 446 aaPredicted RBP10.29□□□□□ -0.76
NPHP1-207ENST00000445609 PGBD4Q96DM1 585 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 EDEM3Q9BZQ6 932 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 TTYH3Q9C0H2 523 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 C1orf112Q9NSG2 853 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 CAPN11Q9UMQ6 739 aa10.29□□□□□ -0.76
NPHP1-207ENST00000445609 LUC7L2Q9Y383 392 aaKnown RBP10.29□□□□□ -0.76
NPHP1-207ENST00000445609 SMIM28A0A1B0GU29 152 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 A0A1W2PQJ5 194 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 C9IYK1 514 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 AKR1B15C9JRZ8 316 aaPredicted RBP10.28□□□□□ -0.76
NPHP1-207ENST00000445609 NOL4O94818 638 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 KCNE1P15382 129 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 RAG1P15918 1043 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 FXR1P51114 621 aaKnown RBP eCLIP10.28□□□□□ -0.76
NPHP1-207ENST00000445609 FAM189BP81408 668 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 APBA1Q02410 837 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 DEFB128Q7Z7B8 93 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 ECHDC2Q86YB7 292 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 ZNF397Q8NF99 534 aaPredicted RBP10.28□□□□□ -0.76
NPHP1-207ENST00000445609 ZMAT2Q96NC0 199 aaKnown RBP10.28□□□□□ -0.76
NPHP1-207ENST00000445609 CXCL16Q9H2A7 254 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 SIX2Q9NPC8 291 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 GIT1Q9Y2X7 761 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 MEIS3P2A8K0S8 358 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 ENPP3O14638 875 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 VNN1O95497 513 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 EOMESO95936 686 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 HLA-DRAP01903 254 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 UCHL3P15374 230 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 PIK3CAP42336 1068 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 ADKP55263 362 aaKnown RBP10.28□□□□□ -0.76
NPHP1-207ENST00000445609 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
NPHP1-207ENST00000445609 TRPC3Q13507 836 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 NCOA4Q13772 614 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 ZBTB6Q15916 424 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 AGMOQ6ZNB7 445 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 CACNA2D4Q7Z3S7 1137 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 CNGA4Q8IV77 575 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 RNF169Q8NCN4 708 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 LINC01599Q8WXQ3 324 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 LPPQ93052 612 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 GANQ9H2C0 597 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 CEP72Q9P209 647 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 FBXL5Q9UKA1 691 aa10.28□□□□□ -0.76
NPHP1-207ENST00000445609 RNF225M0QZC1 329 aaPredicted RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 ZC3H11AO75152 810 aaKnown RBP eCLIP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 LRRN2O75325 713 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 CST3P01034 146 aaPredicted RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 ATF7P17544 494 aaPredicted RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 KRT9P35527 623 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 ZBED6P86452 979 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 WDR44Q5JSH3 913 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 C1orf127Q8N9H9 656 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 CCDC150Q8NCX0 1101 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 GAD1Q99259 594 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 APEX2Q9UBZ4 518 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 DAAM1Q9Y4D1 1078 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 XPOTO43592 962 aaKnown RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 MFAP3LO75121 409 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 IBSPP21815 317 aaPredicted RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 ITGB8P26012 769 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 MLH1P40692 756 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 LRMPQ12912 555 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 ARID5BQ14865 1188 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 SGSM1Q2NKQ1 1148 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 GLRA4Q5JXX5 417 aa10.27□□□□□ -0.77
NPHP1-207ENST00000445609 COL13A1Q5TAT6 717 aaPredicted RBP10.27□□□□□ -0.77
NPHP1-207ENST00000445609 MFSD5Q6N075 450 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms