RNA–Protein interactions for RNA: ENST00000445388.5

SEC22C-208, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-208ENST00000445388 C3orf58Q8NDZ4 430 aa16.72■□□□□ 0.27
SEC22C-208ENST00000445388 DHX58Q96C10 678 aa16.72■□□□□ 0.27
SEC22C-208ENST00000445388 FBXL18Q96ME1 805 aa16.72■□□□□ 0.27
SEC22C-208ENST00000445388 FGFBP2Q9BYJ0 223 aa16.72■□□□□ 0.27
SEC22C-208ENST00000445388 ST6GALNAC4Q9H4F1 302 aa16.72■□□□□ 0.27
SEC22C-208ENST00000445388 C5orf42Q9H799 3197 aa16.72■□□□□ 0.27
SEC22C-208ENST00000445388 SF3B1O75533 1304 aaKnown RBP eCLIP16.71■□□□□ 0.27
SEC22C-208ENST00000445388 I3L4J1 428 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 FAM189A1O60320 539 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 B3GAT3O94766 335 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 SPATA31D3P0C874 917 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 SCP2P22307 547 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 BRCC3P46736 316 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 ME1P48163 572 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 KCNA1Q09470 495 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 CBX2Q14781 532 aaPredicted RBP16.71■□□□□ 0.27
SEC22C-208ENST00000445388 HERC4Q5GLZ8 1057 aaPredicted RBP16.71■□□□□ 0.27
SEC22C-208ENST00000445388 ATL3Q6DD88 541 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 SPATA31D4Q6ZUB0 917 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 PALB2Q86YC2 1186 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 KCNG4Q8TDN1 519 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 STRA6Q9BX79 667 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 MRPL44Q9H9J2 332 aaKnown RBP16.71■□□□□ 0.27
SEC22C-208ENST00000445388 PANK4Q9NVE7 773 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 RCOR1Q9UKL0 485 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
SEC22C-208ENST00000445388 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 A0A0B4J269 797 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 TTC26A0AVF1 554 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 OGTO15294 1046 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 PPP1R37O75864 691 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 ADH1AP07327 375 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 CLTAP09496 248 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 GAP43P17677 238 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 CASP5P51878 434 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 TMC5Q6UXY8 1006 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 LNX1Q8TBB1 728 aaPredicted RBP16.7■□□□□ 0.26
SEC22C-208ENST00000445388 RPGRIP1Q96KN7 1286 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 UROC1Q96N76 676 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 TTPALQ9BTX7 342 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 MSTO1Q9BUK6 570 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 PHF7Q9BWX1 381 aaPredicted RBP16.7■□□□□ 0.26
SEC22C-208ENST00000445388 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 DZANK1Q9NVP4 752 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 KBTBD4Q9NVX7 518 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 SEL1LQ9UBV2 794 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 TUBGCP4Q9UGJ1 667 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 CUL9Q8IWT3 2517 aa16.7■□□□□ 0.26
SEC22C-208ENST00000445388 FRMD3A2A2Y4 597 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 LOC730098B7Z3J9 87 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 TMEM189-UBE2V1I3L0A0 370 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 PODXLO00592 558 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 POLR2DO15514 142 aaKnown RBP16.69■□□□□ 0.26
SEC22C-208ENST00000445388 SP100P23497 879 aaPredicted RBP16.69■□□□□ 0.26
SEC22C-208ENST00000445388 ITIH3Q06033 890 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 ENOX2Q16206 610 aaKnown RBP16.69■□□□□ 0.26
SEC22C-208ENST00000445388 RESP18Q5W5W9 173 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 CES5AQ6NT32 575 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 HPS3Q969F9 1004 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 POP1Q99575 1024 aaKnown RBP16.69■□□□□ 0.26
SEC22C-208ENST00000445388 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 POMKQ9H5K3 350 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 FNIP2Q9P278 1114 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 PLXNA3P51805 1871 aa16.69■□□□□ 0.26
SEC22C-208ENST00000445388 SPDYE4A6NLX3 237 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 PI4K2BG5E9Z4 385 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 ADAM12O43184 909 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 TGM5O43548 720 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 GCNT3O95395 438 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 GLUD1P00367 558 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 FGFR3P22607 806 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
SEC22C-208ENST00000445388 CASP1P29466 404 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 ABCD1P33897 745 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 ACOT2P49753 483 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 ELAVL2Q12926 359 aaKnown RBP16.68■□□□□ 0.26
SEC22C-208ENST00000445388 LILRA6Q6PI73 481 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 RNF135Q8IUD6 432 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 IQUBQ8NA54 791 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 GLIS3Q8NEA6 775 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 PIK3R5Q8WYR1 880 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 FAM212AQ96EL1 285 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 KIF12Q96FN5 646 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
SEC22C-208ENST00000445388 TRIM9Q9C026 710 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 RPF1Q9H9Y2 349 aaKnown RBP16.68■□□□□ 0.26
SEC22C-208ENST00000445388 PLEKHA5Q9HAU0 1116 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 OLFML3Q9NRN5 406 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.68■□□□□ 0.26
SEC22C-208ENST00000445388 CPSF3Q9UKF6 684 aaKnown RBP16.68■□□□□ 0.26
SEC22C-208ENST00000445388 STYXL1Q9Y6J8 313 aa16.68■□□□□ 0.26
SEC22C-208ENST00000445388 CITO14578 2027 aa16.67■□□□□ 0.26
SEC22C-208ENST00000445388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
SEC22C-208ENST00000445388 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms