RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 MTIF3Q9H2K0 278 aaKnown RBP9.51□□□□□ -0.89
FXR1-203ENST00000445140 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
FXR1-203ENST00000445140 MAPK8IP1Q9UQF2 711 aa9.51□□□□□ -0.89
FXR1-203ENST00000445140 ANO9A1A5B4 782 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 AMHP03971 560 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 ITGA4P13612 1032 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 RPL9P32969 192 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 KRT31Q15323 416 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 TCTN1Q2MV58 587 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 EPC2Q52LR7 807 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 ISM2Q6H9L7 571 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 TWF2Q6IBS0 349 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 AGMOQ6ZNB7 445 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 CBWD2Q8IUF1 395 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 LRRC52Q8N7C0 313 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 PPP1R13LQ8WUF5 828 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 OSBPL7Q9BZF2 842 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 INTS13Q9NVM9 706 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 UBQLN1Q9UMX0 589 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 GBF1Q92538 1859 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 TISP43B9A030 160 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 RECQL4O94761 1208 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 EFEMP2O95967 443 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 C4BPAP04003 597 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 TPM2P07951 284 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 CASP4P49662 377 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 COPB1P53618 953 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 TPD52L1Q16890 204 aaPredicted RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 VWA3BQ502W6 1294 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 TMEM240Q5SV17 173 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 PLEKHO2Q8TD55 490 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 TOP1MTQ969P6 601 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 DDX27Q96GQ7 796 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 PCMTD1Q96MG8 357 aaPredicted RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 TUBGCP2Q9BSJ2 902 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 PRO3102Q9H379 93 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 RSAD1Q9HA92 442 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 SAMSN1Q9NSI8 373 aaKnown RBP9.5□□□□□ -0.89
FXR1-203ENST00000445140 ANKFY1Q9P2R3 1169 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 MYO6Q9UM54 1294 aa9.5□□□□□ -0.89
FXR1-203ENST00000445140 LRRIQ3A6PVS8 624 aaPredicted RBP9.49□□□□□ -0.89
FXR1-203ENST00000445140 CLIC2O15247 247 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 OFD1O75665 1012 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 AFPP02771 609 aaKnown RBP9.49□□□□□ -0.89
FXR1-203ENST00000445140 AARSP49588 968 aaKnown RBP eCLIP9.49□□□□□ -0.89
FXR1-203ENST00000445140 MRE11P49959 708 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 CYP2J2P51589 502 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 WDR5P61964 334 aaKnown RBP9.49□□□□□ -0.89
FXR1-203ENST00000445140 NR1I3Q14994 352 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 C16orf59Q7L2K0 433 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 C7orf61Q8IZ16 206 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 GSTCDQ8NEC7 633 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 GDF15Q99988 308 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FAM213AQ9BRX8 229 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 NXF3Q9H4D5 531 aaKnown RBP9.49□□□□□ -0.89
FXR1-203ENST00000445140 TPM3P06753 285 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FGFR4P22455 802 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 PNPLA4P41247 253 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 STX17P56962 302 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 CCDC40Q4G0X9 1142 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 KRT39Q6A163 491 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 DPY19L2P1Q6NXN4 242 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FMNL3Q8IVF7 1028 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 TTC39CQ8N584 583 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 PPP1R12CQ9BZL4 782 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 TRIM6Q9C030 488 aaPredicted RBP9.49□□□□□ -0.89
FXR1-203ENST00000445140 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
FXR1-203ENST00000445140 PTGESO14684 152 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 DGKIO75912 1065 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 C1RP00736 705 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FGBP02675 491 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 CSF2RAP15509 400 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FMO5P49326 533 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FANCCQ00597 558 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 TRIM14Q14142 442 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 FBXO22Q8NEZ5 403 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 SCLYQ96I15 445 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 TCHPQ9BT92 498 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 IKZF4Q9H2S9 585 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 NDST4Q9H3R1 872 aa9.49□□□□□ -0.89
FXR1-203ENST00000445140 A0A1W2PQJ5 194 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 LACTBL1A8MY62 500 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 TNFSF9P41273 254 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 CCL23P55773 120 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 TMEM132DQ14C87 1099 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 FILIP1LQ4L180 1135 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 ZBTB41Q5SVQ8 909 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 GLB1LQ6UWU2 654 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 ENOSF1Q7L5Y1 443 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 EFCAB13Q8IY85 973 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 LRRC43Q8N309 656 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 BEST2Q8NFU1 509 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 LMO3Q8TAP4 145 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 URGCPQ8TCY9 931 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 BADQ92934 168 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 SAAL1Q96ER3 474 aa9.48□□□□□ -0.89
FXR1-203ENST00000445140 ANKRD36BP1Q96IX9 119 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms