RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 PTPRSQ13332 1948 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 ARL5CA6NH57 179 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 AFPP02771 609 aaKnown RBP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 NFICP08651 508 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 FMO5P49326 533 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 MRE11P49959 708 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 AP3M2P53677 418 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 UBASH3AP57075 661 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 ZACNQ401N2 412 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 CLLU1OSQ5K130 101 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 TCERG1LQ5VWI1 586 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 TOP1MTQ969P6 601 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 FAM84AQ96KN4 292 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 PPP1R10Q96QC0 940 aaKnown RBP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 GAD1Q99259 594 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 XPO4Q9C0E2 1151 aaKnown RBP16.37■□□□□ 0.21
CCNE1-203ENST00000444983 MIOSQ9NXC5 875 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 IFNKQ9P0W0 207 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 COQ4Q9Y3A0 265 aa16.37■□□□□ 0.21
CCNE1-203ENST00000444983 COL4A6Q14031 1691 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 TNRC18O15417 2968 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-203ENST00000444983 GTPBP10A4D1E9 387 aaKnown RBP16.36■□□□□ 0.21
CCNE1-203ENST00000444983 TEX33O43247 280 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 FGBP02675 491 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 TNNI1P19237 187 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 MLH1P40692 756 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 GCLMP48507 274 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 WDR5P61964 334 aaKnown RBP16.36■□□□□ 0.21
CCNE1-203ENST00000444983 LMBRD2Q68DH5 695 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-203ENST00000444983 PSRC1Q6PGN9 363 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-203ENST00000444983 NPAS4Q8IUM7 802 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 FAM212AQ96EL1 285 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 TMEM8AQ9HCN3 771 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 PLAGL2Q9UPG8 496 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 NR2E3Q9Y5X4 410 aa16.36■□□□□ 0.21
CCNE1-203ENST00000444983 FNDC1Q4ZHG4 1894 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-203ENST00000444983 P4HA2O15460 535 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 STX10O60499 249 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 ACTN1P12814 892 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 PBX1P40424 430 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 TMEM132DQ14C87 1099 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 DUOXA2Q1HG44 320 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 TDRD10Q5VZ19 366 aaKnown RBP16.35■□□□□ 0.21
CCNE1-203ENST00000444983 KRT39Q6A163 491 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 SCARA3Q6AZY7 606 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 OTOP2Q7RTS6 562 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 LMO3Q8TAP4 145 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
CCNE1-203ENST00000444983 PCDHB7Q9Y5E2 793 aa16.35■□□□□ 0.21
CCNE1-203ENST00000444983 TDRD15B5MCY1 1934 aaKnown RBP16.35■□□□□ 0.21
CCNE1-203ENST00000444983 FGFR1P11362 822 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 DEFB103AP81534 67 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 KCNMA1Q12791 1236 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 GLRA4Q5JXX5 417 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 RASIP1Q5U651 963 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 DPY19L2P1Q6NXN4 242 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 RNF169Q8NCN4 708 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 ERGIC2Q96RQ1 377 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 MTMR12Q9C0I1 747 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 RC3H2Q9HBD1 1191 aaKnown RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 N4BP1O75113 896 aaKnown RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 DGKIO75912 1065 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 VNN1O95497 513 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 TPM2P07951 284 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 CYP3A5P20815 502 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 MXI1P50539 228 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 SCNN1GP51170 649 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 TFAMQ00059 246 aaKnown RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 SOX4Q06945 474 aaPredicted RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 FILIP1LQ4L180 1135 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 C1orf127Q8N9H9 656 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 HELQQ8TDG4 1101 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 CACTINQ8WUQ7 758 aaKnown RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 RSPH1Q8WYR4 309 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 MRFAP1L1Q96HT8 127 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 CASD1Q96PB1 797 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 LBHD1Q9BQE6 289 aaPredicted RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 TRIM5Q9C035 493 aa16.34■□□□□ 0.21
CCNE1-203ENST00000444983 CXXC1Q9P0U4 656 aaPredicted RBP16.34■□□□□ 0.21
CCNE1-203ENST00000444983 A0A1W2PQC6 194 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 CST3P01034 146 aaPredicted RBP16.33■□□□□ 0.2
CCNE1-203ENST00000444983 AMHP03971 560 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 THP07101 528 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 ZNF75DP51815 510 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 UBXN1Q04323 297 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 GLB1LQ6UWU2 654 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 TAS1R2Q8TE23 839 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 C18orf25Q96B23 403 aaPredicted RBP16.33■□□□□ 0.2
CCNE1-203ENST00000444983 ZNF689Q96CS4 500 aaPredicted RBP16.33■□□□□ 0.2
CCNE1-203ENST00000444983 SIX4Q9UIU6 781 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 UBQLN1Q9UMX0 589 aaKnown RBP16.33■□□□□ 0.2
CCNE1-203ENST00000444983 SIK3Q9Y2K2 1263 aa16.33■□□□□ 0.2
CCNE1-203ENST00000444983 HOXA2O43364 376 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms