RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.12□□□□□ -0.47
HLA-F-221ENST00000444621 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 SEL1LQ9UBV2 794 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 EXOC7Q9UPT5 735 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 USP20Q9Y2K6 914 aa12.12□□□□□ -0.47
HLA-F-221ENST00000444621 SF3B1O75533 1304 aaKnown RBP eCLIP12.11□□□□□ -0.47
HLA-F-221ENST00000444621 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 C2CD2LO14523 706 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 HNRNPDLO14979 420 aaKnown RBP12.11□□□□□ -0.47
HLA-F-221ENST00000444621 CLASP2O75122 1294 aaKnown RBP12.11□□□□□ -0.47
HLA-F-221ENST00000444621 BRD1O95696 1058 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 ADH1AP07327 375 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 ME1P48163 572 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 ITIH3Q06033 890 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-221ENST00000444621 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-221ENST00000444621 SLFN12LQ6IEE8 588 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 SYCE2Q6PIF2 218 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 DCLRE1AQ6PJP8 1040 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-221ENST00000444621 STXBP4Q6ZWJ1 553 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 DYMQ7RTS9 669 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 UBALD2Q8IYN6 164 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 IQUBQ8NA54 791 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 CDT1Q9H211 546 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
HLA-F-221ENST00000444621 MED19A0JLT2 244 aaPredicted RBP12.1□□□□□ -0.47
HLA-F-221ENST00000444621 CASTOR2A6NHX0 329 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 XPOTO43592 962 aaKnown RBP12.1□□□□□ -0.47
HLA-F-221ENST00000444621 IDEP14735 1019 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 MTHFRP42898 656 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 ZNF131P52739 623 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 MTMR3Q13615 1198 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 KCNC3Q14003 757 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 PTPN14Q15678 1187 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 ATAT1Q5SQI0 421 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 FUT10Q6P4F1 479 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
HLA-F-221ENST00000444621 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 GPR65Q8IYL9 337 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 PDILTQ8N807 584 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 GSTCDQ8NEC7 633 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 AUTS2Q8WXX7 1259 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 DDX12PQ92771 950 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 HVCN1Q96D96 273 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 NECTIN4Q96NY8 510 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 KLHL5Q96PQ7 755 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 TSPAN18Q96SJ8 248 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
HLA-F-221ENST00000444621 PLEKHA5Q9HAU0 1116 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 PTPRHQ9HD43 1115 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 CDH22Q9UJ99 828 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 HCFC2Q9Y5Z7 792 aa12.1□□□□□ -0.47
HLA-F-221ENST00000444621 SMIM28A0A1B0GU29 152 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 C1RP00736 705 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 EDN1P05305 212 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 CLTAP09496 248 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 PROZP22891 400 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 RPL9P32969 192 aaKnown RBP12.09□□□□□ -0.47
HLA-F-221ENST00000444621 GTF2BQ00403 316 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 DSG1Q02413 1049 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 PPP2R3AQ06190 1150 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 MCL1Q07820 350 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 ALCAMQ13740 583 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 POSTNQ15063 836 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 USP49Q70CQ1 688 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 TAS1R3Q7RTX0 852 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 CEP57Q86XR8 500 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 SYCP3Q8IZU3 236 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
HLA-F-221ENST00000444621 RIN2Q8WYP3 895 aaPredicted RBP12.09□□□□□ -0.47
HLA-F-221ENST00000444621 TTPALQ9BTX7 342 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 RPF1Q9H9Y2 349 aaKnown RBP12.09□□□□□ -0.47
HLA-F-221ENST00000444621 MARCH5Q9NX47 278 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 WDR87Q6ZQQ6 2873 aa12.09□□□□□ -0.47
HLA-F-221ENST00000444621 C2CD4DB7Z1M9 353 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 PTGESO14684 152 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 B4GALT3O60512 393 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 B3GAT3O94766 335 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 GLUD1P00367 558 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 CNPP09543 421 aaKnown RBP12.08□□□□□ -0.48
HLA-F-221ENST00000444621 CLCN5P51795 746 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 KRT85P78386 507 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 GLRA4Q5JXX5 417 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 ZNF720Q7Z2F6 126 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 CD302Q8IX05 232 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 HDAC7Q8WUI4 952 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 KCNN1Q92952 543 aa12.08□□□□□ -0.48
HLA-F-221ENST00000444621 ZBTB45Q96K62 511 aaPredicted RBP12.08□□□□□ -0.48
HLA-F-221ENST00000444621 PPP1R10Q96QC0 940 aaKnown RBP12.08□□□□□ -0.48
HLA-F-221ENST00000444621 ACCSQ96QU6 501 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms