RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 KIF12Q96FN5 646 aa18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 DDX27Q96GQ7 796 aaKnown RBP18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 PPP1R10Q96QC0 940 aaKnown RBP18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 RPF1Q9H9Y2 349 aaKnown RBP18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 PTPRHQ9HD43 1115 aa18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 BDP1A6H8Y1 2624 aa18.29■□□□□ 0.52
TSPAN9-204ENST00000444315 FAM86C2PA6NEL3 165 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 PODXLO00592 558 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 CLTAP09496 248 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 SPATA31D3P0C874 917 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 PROZP22891 400 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 MCM4P33991 863 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 ZNF131P52739 623 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 AMPD3Q01432 767 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 MCL1Q07820 350 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 KCNC3Q14003 757 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 TMEM31Q5JXX7 168 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 LIN9Q5TKA1 542 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 SPATA31D4Q6ZUB0 917 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 CCDC65Q8IXS2 484 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 SEL1LQ9UBV2 794 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 MUTYHQ9UIF7 546 aa18.28■□□□□ 0.52
TSPAN9-204ENST00000444315 PDCD11Q14690 1871 aaKnown RBP18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 MYMKA6NI61 221 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 OGTO15294 1046 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 BRD1O95696 1058 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 SPAG1Q07617 926 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 ZC2HC1CQ53FD0 456 aaPredicted RBP18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 RTP2Q5QGT7 225 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 KIAA0319Q5VV43 1072 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 ADALQ6DHV7 355 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 STXBP4Q6ZWJ1 553 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 RNF135Q8IUD6 432 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 TDRD5Q8NAT2 981 aaKnown RBP18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 STAMQ92783 540 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 S1PR5Q9H228 398 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 PANK4Q9NVE7 773 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 CNTN3Q9P232 1028 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 CDH22Q9UJ99 828 aa18.27■□□□□ 0.52
TSPAN9-204ENST00000444315 I3L4J1 428 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 ASIC1P78348 528 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 DNM1Q05193 864 aaKnown RBP18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 ATL3Q6DD88 541 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 SLFN12LQ6IEE8 588 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 CCDC149Q6ZUS6 474 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 MAP4K3Q8IVH8 894 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 IQUBQ8NA54 791 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 POMGNT1Q8WZA1 660 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 SUSD6Q92537 303 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 C18orf25Q96B23 403 aaPredicted RBP18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 HVCN1Q96D96 273 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 ACCSQ96QU6 501 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 POMKQ9H5K3 350 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 RXFP1Q9HBX9 757 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 CHST7Q9NS84 486 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 FNIP2Q9P278 1114 aa18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 MORC2Q9Y6X9 1032 aaPredicted RBP18.26■□□□□ 0.51
TSPAN9-204ENST00000444315 CCDC195A0A1B0GUA6 201 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 C19orf67A6NJJ6 358 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 LILRB3O75022 631 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 KCNE1P15382 129 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 TNFSF9P41273 254 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 BRCC3P46736 316 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 ARPP19P56211 112 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 PKP1Q13835 747 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 NAB2Q15742 525 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 UPP1Q16831 310 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 RNF168Q8IYW5 571 aaPredicted RBP18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 CEP57L1Q8IYX8 460 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 KHSRPQ92945 711 aaKnown RBP eCLIP18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 ACSF2Q96CM8 615 aaPredicted RBP18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 CUEDC2Q9H467 287 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 POLIQ9UNA4 740 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 PCDHB13Q9Y5F0 798 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 ATP6V1DQ9Y5K8 247 aa18.25■□□□□ 0.51
TSPAN9-204ENST00000444315 PI4K2BG5E9Z4 385 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 TMEM189-UBE2V1I3L0A0 370 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 ABLIM1O14639 778 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 TGM5O43548 720 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 TKTP29401 623 aaKnown RBP18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 RPL9P32969 192 aaKnown RBP18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 KRT85P78386 507 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 GTF2BQ00403 316 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 SOX4Q06945 474 aaPredicted RBP18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 ALCAMQ13740 583 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 ANKS3Q6ZW76 656 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 KREMEN2Q8NCW0 462 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 BEST2Q8NFU1 509 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 PIK3R5Q8WYR1 880 aa18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 SMG7Q92540 1137 aaKnown RBP18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 ZMAT2Q96NC0 199 aaKnown RBP18.24■□□□□ 0.51
TSPAN9-204ENST00000444315 TNMDQ9H2S6 317 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms