RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 ELMSAN1Q6PJG2 1045 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 CCDC149Q6ZUS6 474 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 HDAC7Q8WUI4 952 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 ACSF2Q96CM8 615 aaPredicted RBP15.34■□□□□ 0.05
TREX1-202ENST00000444177 BICD1Q96G01 975 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 TCHPQ9BT92 498 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.34■□□□□ 0.05
TREX1-202ENST00000444177 FNIP2Q9P278 1114 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 ANKFY1Q9P2R3 1169 aa15.34■□□□□ 0.05
TREX1-202ENST00000444177 H0YCG3 227 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 TGM5O43548 720 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 RFPL2O75678 378 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 RPL17P18621 184 aaKnown RBP15.33■□□□□ 0.04
TREX1-202ENST00000444177 ANP32AP39687 249 aaKnown RBP15.33■□□□□ 0.04
TREX1-202ENST00000444177 MATR3P43243 847 aaKnown RBP eCLIP15.33■□□□□ 0.04
TREX1-202ENST00000444177 OSTNP61366 133 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 MPZL3Q6UWV2 235 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 CYP26C1Q6V0L0 522 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 CCDC73Q6ZRK6 1079 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 DYMQ7RTS9 669 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 CEP120Q8N960 986 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 HASPINQ8TF76 798 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 NTPCRQ9BSD7 190 aaKnown RBP15.33■□□□□ 0.04
TREX1-202ENST00000444177 CCDC94Q9BW85 323 aaPredicted RBP15.33■□□□□ 0.04
TREX1-202ENST00000444177 RHOBTB2Q9BYZ6 727 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 SMOC2Q9H3U7 446 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 PLEKHA4Q9H4M7 779 aa15.33■□□□□ 0.04
TREX1-202ENST00000444177 SF3B1O75533 1304 aaKnown RBP eCLIP15.33■□□□□ 0.04
TREX1-202ENST00000444177 A0A087X0B3 334 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 TRAK2O60296 914 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 KIF4AO95239 1232 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 PDGFBP01127 241 aaPredicted RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 AVPR2P30518 371 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 GRM5P41594 1212 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 ZNF131P52739 623 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 YARSP54577 528 aaKnown RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 VCPP55072 806 aaKnown RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 CREMQ03060 361 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 GLRA4Q5JXX5 417 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 RTP2Q5QGT7 225 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 FAM171A1Q5VUB5 890 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 PRSS55Q6UWB4 352 aaPredicted RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 SV2BQ7L1I2 683 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 ALYREFQ86V81 257 aaKnown RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 GLYCTKQ8IVS8 523 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 PDILTQ8N807 584 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 PRSS33Q8NF86 280 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 KCNG4Q8TDN1 519 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 ZNF707Q96C28 371 aaPredicted RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 TTPALQ9BTX7 342 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 PANK2Q9BZ23 570 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 PTPRHQ9HD43 1115 aa15.32■□□□□ 0.04
TREX1-202ENST00000444177 WDR6Q9NNW5 1121 aaKnown RBP15.32■□□□□ 0.04
TREX1-202ENST00000444177 CUTAO60888 179 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 TOM1L1O75674 476 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 PAPLNO95428 1278 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 MCF2P10911 925 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 PROZP22891 400 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 LIG4P49917 911 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 DNM1Q05193 864 aaKnown RBP15.31■□□□□ 0.04
TREX1-202ENST00000444177 NOLC1Q14978 699 aaKnown RBP eCLIP15.31■□□□□ 0.04
TREX1-202ENST00000444177 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 LNX1Q8TBB1 728 aaPredicted RBP15.31■□□□□ 0.04
TREX1-202ENST00000444177 PIK3R5Q8WYR1 880 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 SMG7Q92540 1137 aaKnown RBP15.31■□□□□ 0.04
TREX1-202ENST00000444177 DDX12PQ92771 950 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
TREX1-202ENST00000444177 PPP1R10Q96QC0 940 aaKnown RBP15.31■□□□□ 0.04
TREX1-202ENST00000444177 PRRX2Q99811 253 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 CLSTN3Q9BQT9 956 aa15.31■□□□□ 0.04
TREX1-202ENST00000444177 TOPORSQ9NS56 1045 aaPredicted RBP15.31■□□□□ 0.04
TREX1-202ENST00000444177 MYMKA6NI61 221 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 ABLIM1O14639 778 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 HNRNPDLO14979 420 aaKnown RBP15.3■□□□□ 0.04
TREX1-202ENST00000444177 N4BP1O75113 896 aaKnown RBP15.3■□□□□ 0.04
TREX1-202ENST00000444177 IGFBP6P24592 240 aaPredicted RBP15.3■□□□□ 0.04
TREX1-202ENST00000444177 NMT1P30419 496 aaKnown RBP15.3■□□□□ 0.04
TREX1-202ENST00000444177 ME1P48163 572 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 ELAVL2Q12926 359 aaKnown RBP15.3■□□□□ 0.04
TREX1-202ENST00000444177 DCLRE1AQ6PJP8 1040 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 SHC4Q6S5L8 630 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 SFR1Q86XK3 245 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 PRKD2Q9BZL6 878 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 KCNK12Q9HB15 430 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 PIDD1Q9HB75 910 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 ZDHHC7Q9NXF8 308 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 TBX20Q9UMR3 447 aa15.3■□□□□ 0.04
TREX1-202ENST00000444177 ZFHX2Q9C0A1 2572 aaPredicted RBP15.3■□□□□ 0.04
TREX1-202ENST00000444177 C2orf16Q68DN1 1984 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 PLXNA3P51805 1871 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 CLUHO75153 1309 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 SMIM28A0A1B0GU29 152 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 CLDN3O15551 220 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 ZMYND10O75800 440 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 B3GAT3O94766 335 aa15.29■□□□□ 0.04
TREX1-202ENST00000444177 SCP2P22307 547 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms