RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PTPN21Q16825 1174 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 UPP1Q16831 310 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 SEZ6Q53EL9 994 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 XKR4Q5GH76 650 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.94■■□□□ 1.1
LRCH3-208ENST00000443727 TRIM67Q6ZTA4 783 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 CMASQ8NFW8 434 aaPredicted RBP21.94■■□□□ 1.1
LRCH3-208ENST00000443727 ACSF2Q96CM8 615 aaPredicted RBP21.94■■□□□ 1.1
LRCH3-208ENST00000443727 USP28Q96RU2 1077 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 PIDD1Q9HB75 910 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 STK17AQ9UEE5 414 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 MYH11P35749 1972 aa21.94■■□□□ 1.1
LRCH3-208ENST00000443727 RFPL2O75678 378 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 C1RP00736 705 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 KCNE1P15382 129 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 SOX4Q06945 474 aaPredicted RBP21.93■■□□□ 1.1
LRCH3-208ENST00000443727 MCL1Q07820 350 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 SLC39A14Q15043 492 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 STK38Q15208 465 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 OTOP3Q7RTS5 596 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 PLCD3Q8N3E9 789 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 KREMEN2Q8NCW0 462 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 LNX1Q8TBB1 728 aaPredicted RBP21.93■■□□□ 1.1
LRCH3-208ENST00000443727 FEZF2Q8TBJ5 459 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 SMG7Q92540 1137 aaKnown RBP21.93■■□□□ 1.1
LRCH3-208ENST00000443727 ZMAT2Q96NC0 199 aaKnown RBP21.93■■□□□ 1.1
LRCH3-208ENST00000443727 CNTN3Q9P232 1028 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 USTQ9Y2C2 406 aa21.93■■□□□ 1.1
LRCH3-208ENST00000443727 TMEM221A6NGB7 291 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 M0R296 226 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 PODXLO00592 558 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 CLTAP09496 248 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 ABCD1P33897 745 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 CYP26C1Q6V0L0 522 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 HFE2Q6ZVN8 426 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 SV2BQ7L1I2 683 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 ZNF396Q96N95 335 aaPredicted RBP21.92■■□□□ 1.1
LRCH3-208ENST00000443727 CLSTN3Q9BQT9 956 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 LIMD1Q9UGP4 676 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 NUB1Q9Y5A7 615 aa21.92■■□□□ 1.1
LRCH3-208ENST00000443727 I3L4J1 428 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 FGFR3P22607 806 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 IGFBP6P24592 240 aaPredicted RBP21.91■■□□□ 1.1
LRCH3-208ENST00000443727 RPL9P32969 192 aaKnown RBP21.91■■□□□ 1.1
LRCH3-208ENST00000443727 KYAT1Q16773 422 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 SLC10A6Q3KNW5 377 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 LIN9Q5TKA1 542 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 FOXD4L5Q5VV16 416 aaPredicted RBP21.91■■□□□ 1.1
LRCH3-208ENST00000443727 LILRA6Q6PI73 481 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 CCDC73Q6ZRK6 1079 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 DYMQ7RTS9 669 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 ZDHHC14Q8IZN3 488 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 FOXD4L4Q8WXT5 416 aaPredicted RBP21.91■■□□□ 1.1
LRCH3-208ENST00000443727 STAMQ92783 540 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 C18orf25Q96B23 403 aaPredicted RBP21.91■■□□□ 1.1
LRCH3-208ENST00000443727 MFSD14AQ96MC6 490 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 PANK2Q9BZ23 570 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 ZDHHC7Q9NXF8 308 aa21.91■■□□□ 1.1
LRCH3-208ENST00000443727 CXCL8P10145 99 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 TKTP29401 623 aaKnown RBP21.9■■□□□ 1.1
LRCH3-208ENST00000443727 NMT1P30419 496 aaKnown RBP21.9■■□□□ 1.1
LRCH3-208ENST00000443727 STAT6P42226 847 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 BRCC3P46736 316 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 SIGLEC14Q08ET2 396 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 MTMR3Q13615 1198 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 C3orf58Q8NDZ4 430 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 KCNN1Q92952 543 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 PBXIP1Q96AQ6 731 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 MSTO1Q9BUK6 570 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 PLEKHA5Q9HAU0 1116 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 SORCS3Q9UPU3 1222 aa21.9■■□□□ 1.1
LRCH3-208ENST00000443727 ASGR2P07307 311 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 OR1D2P34982 312 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 NASPP49321 788 aaPredicted RBP21.89■■□□□ 1.09
LRCH3-208ENST00000443727 PPP2R3AQ06190 1150 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 ANKS3Q6ZW76 656 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 DDX12PQ92771 950 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 PRKD2Q9BZL6 878 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 HAPLN2Q9GZV7 340 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 WDR6Q9NNW5 1121 aaKnown RBP21.89■■□□□ 1.09
LRCH3-208ENST00000443727 TFIP11Q9UBB9 837 aaKnown RBP21.89■■□□□ 1.09
LRCH3-208ENST00000443727 PLXNA3P51805 1871 aa21.89■■□□□ 1.09
LRCH3-208ENST00000443727 CLUHO75153 1309 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 OGTO15294 1046 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 MEFVO15553 781 aaPredicted RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 ADAM12O43184 909 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 ZMYND10O75800 440 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 PIGRP01833 764 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 PDIA4P13667 645 aaKnown RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 GBP2P32456 591 aaPredicted RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 GTF2BQ00403 316 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 SPAG1Q07617 926 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 ZC2HC1CQ53FD0 456 aaPredicted RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 PPM1LQ5SGD2 360 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 CD300LGQ6UXG3 332 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 SFR1Q86XK3 245 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 UBALD2Q8IYN6 164 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 ZNF707Q96C28 371 aaPredicted RBP21.88■■□□□ 1.09
LRCH3-208ENST00000443727 KIF12Q96FN5 646 aa21.88■■□□□ 1.09
LRCH3-208ENST00000443727 RHOBTB2Q9BYZ6 727 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms