RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ASB16Q96NS5 453 aa15.46■□□□□ 0.07
LINC00642-202ENST00000442515 SLC26A6Q9BXS9 759 aa15.46■□□□□ 0.07
LINC00642-202ENST00000442515 RNF26Q9BY78 433 aaPredicted RBP15.46■□□□□ 0.07
LINC00642-202ENST00000442515 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
LINC00642-202ENST00000442515 RBM12Q9NTZ6 932 aaKnown RBP15.46■□□□□ 0.07
LINC00642-202ENST00000442515 PKD1L2Q7Z442 2459 aa15.46■□□□□ 0.07
LINC00642-202ENST00000442515 LAMA5O15230 3695 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 NOTCH4Q99466 2003 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 A0A1B0GUA9 196 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 KCNK5O95279 499 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 PSMC3P17980 439 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 FGFR3P22607 806 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 CCNE1P24864 410 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 NLRP5P59047 1200 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 FGD1P98174 961 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 NAB2Q15742 525 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 NTRK3Q16288 839 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 STPG1Q5TH74 334 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 Q6ZS52 159 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 OTUD6AQ7L8S5 288 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 ARRDC1-AS1Q9H2J1 176 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 C2orf42Q9NWW7 574 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 PCDHA4Q9UN74 947 aa15.45■□□□□ 0.06
LINC00642-202ENST00000442515 IGF2RP11717 2491 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 FREM2Q5SZK8 3169 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 ARHGEF37A1IGU5 675 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 ZBTB39O15060 712 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 LRG1P02750 347 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 THP07101 528 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 PTPN2P17706 415 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 IGFBP6P24592 240 aaPredicted RBP15.44■□□□□ 0.06
LINC00642-202ENST00000442515 HOXC13P31276 330 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 CCR2P41597 374 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 POU5F1BQ06416 359 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 SPIRE1Q08AE8 756 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 LRRC32Q14392 662 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 DEPDC1BQ8WUY9 529 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 SMARCD2Q92925 531 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 CORO1BQ9BR76 489 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 CXCL16Q9H2A7 254 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 KCNMB3Q9NPA1 279 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
LINC00642-202ENST00000442515 NCANO14594 1321 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 COL4A2P08572 1712 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 TDRD15B5MCY1 1934 aaKnown RBP15.43■□□□□ 0.06
LINC00642-202ENST00000442515 M0R2N6 131 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 ARNTLO00327 626 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 AXIN1O15169 862 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 RECQL4O94761 1208 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 ZNF806P0C7X5 589 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 GLRA2P23416 452 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 TKTP29401 623 aaKnown RBP15.43■□□□□ 0.06
LINC00642-202ENST00000442515 WDR44Q5JSH3 913 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 PSAPL1Q6NUJ1 521 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
LINC00642-202ENST00000442515 KDF1Q8NAX2 398 aaPredicted RBP15.43■□□□□ 0.06
LINC00642-202ENST00000442515 BRF1Q92994 677 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 DDX27Q96GQ7 796 aaKnown RBP15.43■□□□□ 0.06
LINC00642-202ENST00000442515 ZSWIM3Q96MP5 696 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 LSM14BQ9BX40 385 aaKnown RBP15.43■□□□□ 0.06
LINC00642-202ENST00000442515 SH3GLB2Q9NR46 395 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 SNTG2Q9NY99 539 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 BACE2Q9Y5Z0 518 aa15.43■□□□□ 0.06
LINC00642-202ENST00000442515 PRRG1O14668 218 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 ZNF263O14978 683 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 MICAL2O94851 1124 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 EPN2O95208 641 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 CPA1P15085 419 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 ARL2P36404 184 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 VIPR2P41587 438 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 ROR1Q01973 937 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 CYP4A11Q02928 519 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 CTTNQ14247 550 aaKnown RBP15.42■□□□□ 0.06
LINC00642-202ENST00000442515 EPHA7Q15375 998 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 INF2Q27J81 1249 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 TSGA10IPQ3SY00 556 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 Q6ZUG5 572 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 ANKS3Q6ZW76 656 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 WDR5BQ86VZ2 330 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 MSANTD3Q96H12 275 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 DYDC2Q96IM9 177 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 FAM20AQ96MK3 541 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 SMOC1Q9H4F8 434 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 ZSWIM4Q9H7M6 989 aa15.42■□□□□ 0.06
LINC00642-202ENST00000442515 TMEM189-UBE2V1I3L0A0 370 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 ZNF197O14709 1029 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 B3GAT3O94766 335 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
LINC00642-202ENST00000442515 IFNAR1P17181 557 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 ELF1P32519 619 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 SOX9P48436 509 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 KRT32Q14532 448 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 NCAPH2Q6IBW4 605 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 C1orf228Q6PIY5 440 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 BLIDQ8IZY5 108 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 LOXL4Q96JB6 756 aa15.41■□□□□ 0.06
LINC00642-202ENST00000442515 TMEM121BQ9BXQ6 578 aaPredicted RBP15.41■□□□□ 0.06
LINC00642-202ENST00000442515 DMXL2Q8TDJ6 3036 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms