RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141	GOLGA6L6	A8MZA4	724 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	SLC16A6	O15403	523 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	TSPAN6	O43657	245 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	MFAP3L	O75121	409 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	IPO13	O94829	963 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	ARIH2	O95376	493 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	SCGB1D2	O95969	90 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	PTPN7	P35236	360 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	APBA1	Q02410	837 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	PPP3CA	Q08209	521 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	RABL3	Q5HYI8	236 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	LY6G5C	Q5SRR4	150 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	IFIT1B	Q5T764	474 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	RSPH3	Q86UC2	560 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	VRK3	Q8IV63	474 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	FMNL3	Q8IVF7	1028 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	RHOT1	Q8IXI2	618 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	TCEAL8	Q8IYN2	117 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	MSL3	Q8N5Y2	521 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	CASKIN2	Q8WXE0	1202 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	ZNF764	Q96H86	408 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	GPHA2	Q96T91	129 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	MAP3K14	Q99558	947 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	DMRT3	Q9NQL9	472 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	KMT5A	Q9NQR1	393 aa		4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.23	□□□□□ -1.73
VPS8-208	ENST00000441141	CCDC154	A6NI56	674 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	ZAR1L	A6NP61	321 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141		B5MCH6	92 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	ERC2	O15083	957 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	HTRA2	O43464	458 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	POU2F2	P09086	479 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	GNAT2	P19087	354 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	PDC	P20941	246 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	CASR	P41180	1078 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	FLT3LG	P49771	235 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	CDC42EP1	Q00587	391 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	MRPL49	Q13405	166 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	RAB39A	Q14964	217 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	GFOD2	Q3B7J2	385 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	FKBP15	Q5T1M5	1219 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	CCDC181	Q5TID7	509 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	KCNV1	Q6PIU1	500 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	USP45	Q70EL2	814 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	FAM83A	Q86UY5	434 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	PRIMA1	Q86XR5	153 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	DRC7	Q8IY82	874 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	PROKR1	Q8TCW9	393 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	PDCD2L	Q9BRP1	358 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	ADARB2	Q9NS39	739 aa	Known RBP	4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	CHPF2	Q9P2E5	772 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	TRPS1	Q9UHF7	1281 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	POLH	Q9Y253	713 aa		4.22	□□□□□ -1.73
VPS8-208	ENST00000441141	PJA2	O43164	708 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	HOXA3	O43365	443 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	MARCH6	O60337	910 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	GPR32	O75388	356 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	ABHD16A	O95870	558 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	SNRPA1	P09661	255 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	SREBF1	P36956	1147 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	ADAM8	P78325	824 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	CREM	Q03060	361 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	SP140	Q13342	867 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	ACAP1	Q15027	740 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	MLC1	Q15049	377 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	PGS1	Q32NB8	556 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	STRIP1	Q5VSL9	837 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	ZKSCAN2	Q63HK3	967 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	SYCE2	Q6PIF2	218 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	GADL1	Q6ZQY3	521 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141		Q6ZVL8	140 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	RHOU	Q7L0Q8	258 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	DOK3	Q7L591	496 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	WDR75	Q8IWA0	830 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	DPF2	Q92785	391 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	HOXB13	Q92826	284 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	PGBD4	Q96DM1	585 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	C1GALT1C1	Q96EU7	318 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	ZNF512	Q96ME7	567 aa	Predicted RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	GNL3L	Q9NVN8	582 aa	Known RBP	4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	CALCOCO1	Q9P1Z2	691 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	FZD1	Q9UP38	647 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	IPP	Q9Y573	584 aa		4.21	□□□□□ -1.74
VPS8-208	ENST00000441141	KLRG2	A4D1S0	409 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	PRR5-ARHGAP8	B1AHC4	643 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	KIF3B	O15066	747 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	ADCY6	O43306	1168 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	B3GALT2	O43825	422 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	PARN	O95453	639 aa	Known RBP	4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	ITGB1	P05556	798 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	ATF3	P18847	181 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	MGAT1	P26572	445 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	CD38	P28907	300 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	RABGGTB	P53611	331 aa		4.2	□□□□□ -1.74
VPS8-208	ENST00000441141	C21orf58	P58505	322 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms