RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 KLHL40Q2TBA0 621 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 SKOR2Q2VWA4 1001 aaPredicted RBP12.96□□□□□ -0.33
EBF3-203ENST00000440978 GLRA4Q5JXX5 417 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 ISM2Q6H9L7 571 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 MLKLQ8NB16 471 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 ZMAT2Q96NC0 199 aaKnown RBP12.96□□□□□ -0.33
EBF3-203ENST00000440978 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 HCSTQ9UBK5 93 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 DNAJB4Q9UDY4 337 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 MTUS1Q9ULD2 1270 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.33
EBF3-203ENST00000440978 FAN1Q9Y2M0 1017 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 C2CD2Q9Y426 696 aa12.96□□□□□ -0.33
EBF3-203ENST00000440978 BICDL2A1A5D9 508 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 GOLGA8IPA6NC78 632 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 GOLGA8JA6NMD2 632 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 NRP1O14786 923 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 MAPK13O15264 365 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 NR2F2P24468 414 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 CCNE1P24864 410 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 OR1G1P47890 313 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 SLC11A1P49279 550 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 KRT17Q04695 432 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 GPM6BQ13491 265 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 GRIN2CQ14957 1233 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 ZBTB6Q15916 424 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 SPRED2Q7Z698 418 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 CBWD2Q8IUF1 395 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 DEFB123Q8N688 67 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 NOC3LQ8WTT2 800 aaKnown RBP12.95□□□□□ -0.34
EBF3-203ENST00000440978 FAM212AQ96EL1 285 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 KIF12Q96FN5 646 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 DDX27Q96GQ7 796 aaKnown RBP12.95□□□□□ -0.34
EBF3-203ENST00000440978 TMEM169Q96HH4 297 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 COLEC11Q9BWP8 271 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 LMAN2LQ9H0V9 348 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 CXCL16Q9H2A7 254 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 CERS4Q9HA82 394 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 LZTS1Q9Y250 596 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 FRMD4BQ9Y2L6 1034 aa12.95□□□□□ -0.34
EBF3-203ENST00000440978 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
EBF3-203ENST00000440978 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 CETN3O15182 167 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 B4GALT3O60512 393 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 FGF18O76093 207 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 CD44P16070 742 aaKnown RBP12.94□□□□□ -0.34
EBF3-203ENST00000440978 RPL9P32969 192 aaKnown RBP12.94□□□□□ -0.34
EBF3-203ENST00000440978 FKBP3Q00688 224 aaKnown RBP12.94□□□□□ -0.34
EBF3-203ENST00000440978 PAK1Q13153 545 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 ADAM9Q13443 819 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 TMEM132DQ14C87 1099 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 CT47A1Q5JQC4 288 aaPredicted RBP12.94□□□□□ -0.34
EBF3-203ENST00000440978 JADE1Q6IE81 842 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 USP37Q86T82 979 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 BEST2Q8NFU1 509 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 CACTINQ8WUQ7 758 aaKnown RBP12.94□□□□□ -0.34
EBF3-203ENST00000440978 IGSF21Q96ID5 467 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 MFSD14AQ96MC6 490 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 MKNK1Q9BUB5 465 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 LMCD1Q9NZU5 365 aa12.94□□□□□ -0.34
EBF3-203ENST00000440978 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
EBF3-203ENST00000440978 CASTOR2A6NHX0 329 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 ITGB1P05556 798 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 POU3F3P20264 500 aaPredicted RBP12.93□□□□□ -0.34
EBF3-203ENST00000440978 PAX3P23760 479 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 LRPAP1P30533 357 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 PSMC2P35998 433 aaKnown RBP12.93□□□□□ -0.34
EBF3-203ENST00000440978 PBX3P40426 434 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 NLRP12P59046 1061 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 ENPEPQ07075 957 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 CYP24A1Q07973 514 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 PSMD6Q15008 389 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 PTPROQ16827 1216 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 UPP1Q16831 310 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 ANKRD40Q6AI12 368 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 DCLRE1AQ6PJP8 1040 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 WDR49Q8IV35 697 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 ZC3H3Q8IXZ2 948 aaKnown RBP12.93□□□□□ -0.34
EBF3-203ENST00000440978 RDH13Q8NBN7 331 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 GDPD5Q8WTR4 605 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 NELFBQ8WX92 580 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 FNBP1Q96RU3 617 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 GAS2L1Q99501 681 aaPredicted RBP12.93□□□□□ -0.34
EBF3-203ENST00000440978 PRDM12Q9H4Q4 367 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 PDE11AQ9HCR9 933 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 TMEM63CQ9P1W3 806 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 ANK1P16157 1881 aa12.93□□□□□ -0.34
EBF3-203ENST00000440978 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
EBF3-203ENST00000440978 TRIP11Q15643 1979 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 EPOPA6NHQ4 379 aa12.92□□□□□ -0.34
EBF3-203ENST00000440978 NT5C1B-RDH14C9J2C7 533 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms