RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 ECHDC2Q86YB7 292 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 EHBP1Q8NDI1 1231 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 PGBD4Q96DM1 585 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 INTS2Q9H0H0 1204 aaKnown RBP11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 CXCL16Q9H2A7 254 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 C1orf112Q9NSG2 853 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 KLK14Q9P0G3 267 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 CNTN3Q9P232 1028 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 DERAQ9Y315 318 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 COQ4Q9Y3A0 265 aa11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.13□□□□□ -0.63
AP004290.1-201ENST00000440915 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 MEIS3P2A8K0S8 358 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 C9IYK1 514 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 TNNC2P02585 160 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 NFICP08651 508 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 IBSPP21815 317 aaPredicted RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 PON1P27169 355 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 FAM189BP81408 668 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 TFAMQ00059 246 aaKnown RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 TMEM132DQ14C87 1099 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 DUOXA2Q1HG44 320 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 XKR4Q5GH76 650 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 DPY19L2P1Q6NXN4 242 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 CNKSR3Q6P9H4 555 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 AGMOQ6ZNB7 445 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 SLC24A5Q71RS6 500 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 NT5DC4Q86YG4 428 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 FBXL13Q8NEE6 735 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 LMO3Q8TAP4 145 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 TAS1R2Q8TE23 839 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 CACTINQ8WUQ7 758 aaKnown RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 SEMA4DQ92854 862 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 LPPQ93052 612 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 VWCEQ96DN2 955 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 KIF12Q96FN5 646 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 ANKRD36BP1Q96IX9 119 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 NUP58Q9BVL2 599 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 LSM14BQ9BX40 385 aaKnown RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 MTMR12Q9C0I1 747 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 RAB20Q9NX57 234 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 GCNT4Q9P109 453 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 IMPACTQ9P2X3 320 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 GIT1Q9Y2X7 761 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 C2CD2Q9Y426 696 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 KIAA0100Q14667 2235 aaKnown RBP11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 SCN5AQ14524 2016 aa11.12□□□□□ -0.63
AP004290.1-201ENST00000440915 LRRN2O75325 713 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 VNN1O95497 513 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 EOMESO95936 686 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 HLA-DRAP01903 254 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 TMEM191BP0C7N4 346 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 ACTN1P12814 892 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 KCNE1P15382 129 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 DEKP35659 375 aaKnown RBP11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 APBA1Q02410 837 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 BIRC3Q13489 604 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 FIGNQ5HY92 759 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 SCARA3Q6AZY7 606 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 TRIM65Q6PJ69 517 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 TRAPPC11Q7Z392 1133 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 TMEM199Q8N511 208 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 RNF169Q8NCN4 708 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 NEK11Q8NG66 645 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 ZMAT2Q96NC0 199 aaKnown RBP11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 TSPAN18Q96SJ8 248 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 SIX2Q9NPC8 291 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 UBN1Q9NPG3 1134 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 PLCB1Q9NQ66 1216 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 FAM207AQ9NSI2 230 aaPredicted RBP11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 RNF19AQ9NV58 838 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 ALPK3Q96L96 1907 aa11.11□□□□□ -0.63
AP004290.1-201ENST00000440915 SMIM28A0A1B0GU29 152 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 GOLGA6L6A8MZA4 724 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 PTGESO14684 152 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 EPHB6O15197 1021 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 PHACTR2O75167 634 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 NOL4O94818 638 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 CST3P01034 146 aaPredicted RBP11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 GYPCP04921 128 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 CSF2RAP15509 400 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 TRIM14Q14142 442 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 GLRA4Q5JXX5 417 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 KLHDC7AQ5VTJ3 777 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 CCDC186Q7Z3E2 898 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 PPFIBP1Q86W92 1011 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 C7orf61Q8IZ16 206 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
AP004290.1-201ENST00000440915 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms