RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAM193BQ96PV7 902 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 MYL10Q9BUA6 226 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 GPR87Q9BY21 358 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 TRIM8Q9BZR9 551 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 EPC1Q9H2F5 836 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 POFUT1Q9H488 388 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SMC4Q9NTJ3 1288 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 NCDNQ9UBB6 729 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 SH3BP1Q9Y3L3 701 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 CDC42BPGQ6DT37 1551 aa4.22□□□□□ -1.73
HMGB3P11-201ENST00000440127 TTC21BQ7Z4L5 1316 aa4.21□□□□□ -1.73
HMGB3P11-201ENST00000440127 CPS1P31327 1500 aa4.21□□□□□ -1.73
HMGB3P11-201ENST00000440127 ANKRD26Q9UPS8 1709 aa4.21□□□□□ -1.73
HMGB3P11-201ENST00000440127 C2orf78A6NCI8 922 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 TMEM191CA6NGB0 347 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 NARSO43776 548 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 PPFIA2O75334 1257 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 C1SP09871 688 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 ATP2A2P16615 1042 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 CNGA1P29973 690 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 IL2P60568 153 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 PHC1P78364 1004 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 EXOSC10Q01780 885 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 KLF10Q13118 480 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 RRS1Q15050 365 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 ESRP1Q6NXG1 681 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 LMBR1LQ6UX01 489 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 DDX42Q86XP3 938 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 RAVER1Q8IY67 606 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 FTSJ3Q8IY81 847 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 AFAP1L2Q8N4X5 818 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 GLB1L3Q8NCI6 653 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 CHMP4BQ9H444 224 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 CAAP1Q9H8G2 361 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 AGO3Q9H9G7 860 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 THG1LQ9NWX6 298 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 NOB1Q9ULX3 412 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 DDX19BQ9UMR2 479 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 HDAC5Q9UQL6 1122 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 TNNQ9UQP3 1299 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 LAS1LQ9Y4W2 734 aaKnown RBP4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 KNDC1Q76NI1 1749 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 ACEP12821 1306 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 TTC21AQ8NDW8 1320 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 KIF16BQ96L93 1317 aa4.21□□□□□ -1.74
HMGB3P11-201ENST00000440127 CDK12Q9NYV4 1490 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ARHGAP23Q9P227 1491 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 CCDC194A0A1B0GVG4 234 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 FAM83GA6ND36 823 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 OVOL3O00110 214 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZNF853P0CG23 659 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 TRIM27P14373 513 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 GYPEP15421 78 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 LSSP48449 732 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 INHBEP58166 350 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 MEF2AQ02078 507 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 DSG1Q02413 1049 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 METTL24Q5JXM2 366 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 IQSEC1Q6DN90 963 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 CNNM4Q6P4Q7 775 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ATF7IPQ6VMQ6 1270 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 FRMD7Q6ZUT3 714 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 FMNL3Q8IVF7 1028 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZNF610Q8N9Z0 462 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 MDGA1Q8NFP4 955 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ATXN2LQ8WWM7 1075 aaKnown RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 NEU4Q8WWR8 484 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ST8SIA2Q92186 375 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 RTF1Q92541 710 aaKnown RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZNF512Q96ME7 567 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 PDCD2LQ9BRP1 358 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 TARS2Q9BW92 718 aaKnown RBP4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 ZMAT4Q9H898 229 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 MAGEL2Q9UJ55 1249 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 MSRAQ9UJ68 235 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 MAPRE3Q9UPY8 281 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 KIF20BQ96Q89 1820 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 UBR1Q8IWV7 1749 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 PTPRUQ92729 1446 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 MYPNQ86TC9 1320 aa4.2□□□□□ -1.74
HMGB3P11-201ENST00000440127 TRIM24O15164 1050 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 ALDH1A2O94788 518 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 PCDH8O95206 1070 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 SOX5P35711 763 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 ANTXR2P58335 489 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 DUSP2Q05923 314 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 HDAC1Q13547 482 aaPredicted RBP4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 EIF4A2Q14240 407 aaKnown RBP4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 MRGPRGQ86SM5 289 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 CERS3Q8IU89 383 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 ITPRIPQ8IWB1 547 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 TMEM57Q8N5G2 664 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 UBR7Q8N806 425 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 SMC1BQ8NDV3 1235 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 NGDNQ8NEJ9 315 aaKnown RBP4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 CHTF18Q8WVB6 975 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 ARHGAP45Q92619 1136 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 MENTQ9BUN1 341 aa4.19□□□□□ -1.74
HMGB3P11-201ENST00000440127 CEP72Q9P209 647 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms