RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TCHPQ9BT92 498 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 POLR3CQ9BUI4 534 aaPredicted RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TRIM6Q9C030 488 aaPredicted RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 ANKZF1Q9H8Y5 726 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 NHEJ1Q9H9Q4 299 aaPredicted RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 METTL14Q9HCE5 456 aaKnown RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 PLCB1Q9NQ66 1216 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 INTUQ9ULD6 942 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 L1RE1Q9UN81 338 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TRAF3IP3Q9Y228 551 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 REXO2Q9Y3B8 237 aaKnown RBP5.15□□□□□ -1.58
EDEM3-203ENST00000439962 COL4A3BPQ9Y5P4 624 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 TRPV2Q9Y5S1 764 aa5.15□□□□□ -1.58
EDEM3-203ENST00000439962 LRRC37A2A6NM11 1700 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 MYMKA6NI61 221 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 H3BQ06 376 aaPredicted RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 ENPP3O14638 875 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 EIF3DO15371 548 aaKnown RBP eCLIP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 ERLIN2O94905 339 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 ATG7O95352 703 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 GJB5O95377 273 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 AMHP03971 560 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 EIF4BP23588 611 aaKnown RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 BMP8BP34820 402 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 MCCD1P59942 119 aaPredicted RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 ADAM17P78536 824 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 RNASELQ05823 741 aaKnown RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 SPIRE1Q08AE8 756 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 LAMTOR4Q0VGL1 99 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 STK4Q13043 487 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 NAA30Q147X3 362 aaPredicted RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 MTF1Q14872 753 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 IFI16Q16666 785 aaKnown RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 LRIT3Q3SXY7 679 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 GLRA4Q5JXX5 417 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 CCDC122Q5T0U0 273 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 CNKSR3Q6P9H4 555 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 KIAA1328Q86T90 577 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 C1orf131Q8NDD1 294 aaKnown RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 NEK9Q8TD19 979 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 HELQQ8TDG4 1101 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 AUTS2Q8WXX7 1259 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 SECISBP2LQ93073 1101 aaKnown RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 DNAJC19Q96DA6 116 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 FAM212AQ96EL1 285 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 CCDC42Q96M95 316 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 GAS2L1Q99501 681 aaPredicted RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 DESI2Q9BSY9 194 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 POLR3FQ9H1D9 316 aaPredicted RBP5.15□□□□□ -1.59
EDEM3-203ENST00000439962 IKZF4Q9H2S9 585 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 LZTFL1Q9NQ48 299 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 AIPL1Q9NZN9 384 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 CALCOCO1Q9P1Z2 691 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 SEL1LQ9UBV2 794 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 PCDHB7Q9Y5E2 793 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 PCDHA2Q9Y5H9 948 aa5.15□□□□□ -1.59
EDEM3-203ENST00000439962 F8W810 466 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SERPING1P05155 500 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SPATA31C1P0DKV0 1188 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 HOXD8P13378 290 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 IDEP14735 1019 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 RFX1P22670 979 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 RPA1P27694 616 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 GPC3P51654 580 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PMS1P54277 932 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PEX3P56589 373 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SNRPFP62306 86 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 APBA1Q02410 837 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ENPEPQ07075 957 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 EPHA7Q15375 998 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ASTE1Q2TB18 679 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PLEKHG4Q58EX7 1191 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 FAM26FQ5R3K3 315 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PDXDC1Q6P996 788 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PADI6Q6TGC4 694 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 OTUD6AQ7L8S5 288 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SESTD1Q86VW0 696 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 GOLGA6L1Q8N7Z2 621 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 NEK11Q8NG66 645 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 MAFAQ8NHW3 353 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ASAP3Q8TDY4 903 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PSPC1Q8WXF1 523 aaKnown RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 LINC01599Q8WXQ3 324 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 HERVK_113Q902F9 699 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 B3GALT6Q96L58 329 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ZFP42Q96MM3 310 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 NECAB3Q96P71 396 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TUFT1Q9NNX1 390 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 ANKFY1Q9P2R3 1169 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PARP2Q9UGN5 583 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PRG3Q9Y2Y8 225 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 IGSF9BQ9UPX0 1349 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 LAMA1P25391 3075 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 MBLAC1A4D2B0 266 aaPredicted RBP5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TRIM49BA6NDI0 452 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 SPDYE4A6NLX3 237 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 PDXKO00764 312 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 GPR32O75388 356 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 RARRES1P49788 294 aa5.14□□□□□ -1.59
EDEM3-203ENST00000439962 TAP1Q03518 808 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms