RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.57■□□□□ 0.88
CCDC78-204ENST00000439619 NUB1Q9Y5A7 615 aa20.57■□□□□ 0.88
CCDC78-204ENST00000439619 XYLBO75191 536 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 TBCAO75347 108 aaKnown RBP20.56■□□□□ 0.88
CCDC78-204ENST00000439619 KCNE1P15382 129 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 FGFR3P22607 806 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 PTPN5P54829 565 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 PPM1LQ5SGD2 360 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 ALKAL1Q6UXT8 129 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 NXPE3Q969Y0 559 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 CNTN3Q9P232 1028 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 CCDC39Q9UFE4 941 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 FBXW11Q9UKB1 542 aa20.56■□□□□ 0.88
CCDC78-204ENST00000439619 PAPLNO95428 1278 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 TXLNAP40222 546 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 LIG4P49917 911 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 NUBP1P53384 320 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 RAB33AQ14088 237 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 RTL10Q7L3V2 364 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 HAUS6Q7Z4H7 955 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 MYCT1Q8N699 235 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 ZNF707Q96C28 371 aaPredicted RBP20.55■□□□□ 0.88
CCDC78-204ENST00000439619 REEP2Q9BRK0 252 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 IRF2BPLQ9H1B7 796 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 ZHX3Q9H4I2 956 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 KCNK12Q9HB15 430 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 PARVGQ9HBI0 331 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 GOLGA2P5Q9HBQ8 144 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 BACE2Q9Y5Z0 518 aa20.55■□□□□ 0.88
CCDC78-204ENST00000439619 NPHP3-ACAD11A0A0J9YXS1 232 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 PODXLO00592 558 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 HNRNPDLO14979 420 aaKnown RBP20.54■□□□□ 0.88
CCDC78-204ENST00000439619 C8AP07357 584 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 PLCG1P19174 1290 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 AVPR2P30518 371 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 HOXA9P31269 272 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 OR1D2P34982 312 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 NCKAP1LP55160 1127 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 CACNB1Q02641 598 aaPredicted RBP20.54■□□□□ 0.88
CCDC78-204ENST00000439619 MCL1Q07820 350 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 UVSSAQ2YD98 709 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 RAD54LQ92698 747 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 INTS4Q96HW7 963 aaKnown RBP20.54■□□□□ 0.88
CCDC78-204ENST00000439619 PLEKHA5Q9HAU0 1116 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 MTRRQ9UBK8 725 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 FBXL21Q9UKT6 434 aa20.54■□□□□ 0.88
CCDC78-204ENST00000439619 ZFP37Q9Y6Q3 630 aaPredicted RBP20.54■□□□□ 0.88
CCDC78-204ENST00000439619 H7C4K7 107 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 K7ENM7 598 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 CLTAP09496 248 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 HOXD11P31277 338 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-204ENST00000439619 NHLH1Q02575 133 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 KARSQ15046 597 aaKnown RBP20.53■□□□□ 0.88
CCDC78-204ENST00000439619 GET4Q7L5D6 327 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-204ENST00000439619 KRI1Q8N9T8 703 aaKnown RBP20.53■□□□□ 0.88
CCDC78-204ENST00000439619 LARP4BQ92615 738 aaKnown RBP20.53■□□□□ 0.88
CCDC78-204ENST00000439619 ZBTB45Q96K62 511 aaPredicted RBP20.53■□□□□ 0.88
CCDC78-204ENST00000439619 CCSER1Q9C0I3 900 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 EPS15L1Q9UBC2 864 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 POLIQ9UNA4 740 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 CDY1Q9Y6F8 540 aa20.53■□□□□ 0.88
CCDC78-204ENST00000439619 ABLIM1O14639 778 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 SYN3O14994 580 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 XPOTO43592 962 aaKnown RBP20.52■□□□□ 0.88
CCDC78-204ENST00000439619 TRAK2O60296 914 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 FSHRP23945 695 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 TKTP29401 623 aaKnown RBP20.52■□□□□ 0.88
CCDC78-204ENST00000439619 ELF1P32519 619 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 DDIT3P35638 169 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 PPP2R3AQ06190 1150 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 MCM6Q14566 821 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 AXDND1Q5T1B0 1012 aaPredicted RBP20.52■□□□□ 0.88
CCDC78-204ENST00000439619 SLC7A14Q8TBB6 771 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 FEZF2Q8TBJ5 459 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 KCNN1Q92952 543 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 ZMAT2Q96NC0 199 aaKnown RBP20.52■□□□□ 0.88
CCDC78-204ENST00000439619 TBX20Q9UMR3 447 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 DUSP12Q9UNI6 340 aa20.52■□□□□ 0.88
CCDC78-204ENST00000439619 SYT1P21579 422 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 BRCC3P46736 316 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 ZNF131P52739 623 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 SOX4Q06945 474 aaPredicted RBP20.51■□□□□ 0.87
CCDC78-204ENST00000439619 C3orf58Q8NDZ4 430 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 APPL2Q8NEU8 664 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 TSPAN18Q96SJ8 248 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 BACH2Q9BYV9 841 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 STK17AQ9UEE5 414 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 TECTAO75443 2155 aa20.51■□□□□ 0.87
CCDC78-204ENST00000439619 I3L4J1 428 aa20.5■□□□□ 0.87
CCDC78-204ENST00000439619 POU2F2P09086 479 aa20.5■□□□□ 0.87
CCDC78-204ENST00000439619 LAMP2P13473 410 aa20.5■□□□□ 0.87
CCDC78-204ENST00000439619 MARCKSP29966 332 aaPredicted RBP20.5■□□□□ 0.87
CCDC78-204ENST00000439619 MCM4P33991 863 aa20.5■□□□□ 0.87
CCDC78-204ENST00000439619 VCPP55072 806 aaKnown RBP20.5■□□□□ 0.87
CCDC78-204ENST00000439619 SLC10A6Q3KNW5 377 aa20.5■□□□□ 0.87
CCDC78-204ENST00000439619 VARS2Q5ST30 1063 aaKnown RBP20.5■□□□□ 0.87
CCDC78-204ENST00000439619 IER5LQ5T953 404 aa20.5■□□□□ 0.87
CCDC78-204ENST00000439619 GRASPQ7Z6J2 395 aaPredicted RBP20.5■□□□□ 0.87
CCDC78-204ENST00000439619 C18orf25Q96B23 403 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms