RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 KCNK18Q7Z418 384 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 BRAPQ7Z569 592 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 RIN2Q8WYP3 895 aaPredicted RBP12.59□□□□□ -0.39
IRF1-204ENST00000439555 STAMQ92783 540 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 UROC1Q96N76 676 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 PPP1R10Q96QC0 940 aaKnown RBP12.59□□□□□ -0.39
IRF1-204ENST00000439555 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 RUSC1Q9BVN2 902 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 POLD4Q9HCU8 107 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 WDR6Q9NNW5 1121 aaKnown RBP12.59□□□□□ -0.39
IRF1-204ENST00000439555 USP20Q9Y2K6 914 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 ARID2Q68CP9 1835 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 PATJQ8NI35 1801 aa12.59□□□□□ -0.39
IRF1-204ENST00000439555 CCDC195A0A1B0GUA6 201 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 VWA3AA6NCI4 1184 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 CASTOR2A6NHX0 329 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 H0YCG3 227 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 TGM5O43548 720 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 KIF4AO95239 1232 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 MCF2P10911 925 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 PLS3P13797 630 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 PROZP22891 400 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 SMTNP53814 917 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 YARSP54577 528 aaKnown RBP12.58□□□□□ -0.4
IRF1-204ENST00000439555 SLC12A3P55017 1021 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 CUL4AQ13619 759 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 FAM171A1Q5VUB5 890 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 C1orf210Q8IVY1 113 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 SUMF1Q8NBK3 374 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 LNX1Q8TBB1 728 aaPredicted RBP12.58□□□□□ -0.4
IRF1-204ENST00000439555 DDX27Q96GQ7 796 aaKnown RBP12.58□□□□□ -0.4
IRF1-204ENST00000439555 PNMA5Q96PV4 448 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 PAAF1Q9BRP4 392 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 CCDC94Q9BW85 323 aaPredicted RBP12.58□□□□□ -0.4
IRF1-204ENST00000439555 CDT1Q9H211 546 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 SLC38A7Q9NVC3 462 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 DLGAP2Q9P1A6 1054 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 GDAQ9Y2T3 454 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 R4GN57 208 aa12.58□□□□□ -0.4
IRF1-204ENST00000439555 SMIM28A0A1B0GU29 152 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 KRBA1A5PL33 1030 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 STK25O00506 426 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 TRAPPC3O43617 180 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 TOM1L1O75674 476 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 B3GAT3O94766 335 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 PLA2G4BP0C869 781 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 SP9P0CG40 484 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 KCNE1P15382 129 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 PDCP20941 246 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 STRN3Q13033 797 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 UPP1Q16831 310 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 RSPO4Q2I0M5 234 aaPredicted RBP12.57□□□□□ -0.4
IRF1-204ENST00000439555 ZNF528Q3MIS6 628 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 RTP2Q5QGT7 225 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 ZPBP2Q6X784 338 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.57□□□□□ -0.4
IRF1-204ENST00000439555 PALB2Q86YC2 1186 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 RABGGTAQ92696 567 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 ZNF707Q96C28 371 aaPredicted RBP12.57□□□□□ -0.4
IRF1-204ENST00000439555 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 B3GALT6Q96L58 329 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 CLSTN3Q9BQT9 956 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 TARS2Q9BW92 718 aaKnown RBP12.57□□□□□ -0.4
IRF1-204ENST00000439555 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.57□□□□□ -0.4
IRF1-204ENST00000439555 LARSQ9P2J5 1176 aaKnown RBP12.57□□□□□ -0.4
IRF1-204ENST00000439555 ODF2LQ9ULJ1 636 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.57□□□□□ -0.4
IRF1-204ENST00000439555 NCOR2Q9Y618 2525 aa12.57□□□□□ -0.4
IRF1-204ENST00000439555 MYH15Q9Y2K3 1946 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 SFI1A8K8P3 1242 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 PRR5-ARHGAP8B1AHC4 643 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 ABLIM1O14639 778 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 SLC16A4O15374 487 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 ZMYND10O75800 440 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 POU2F2P09086 479 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
IRF1-204ENST00000439555 SRFP11831 508 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 FGFR3P22607 806 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 HOXA9P31269 272 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 LONP1P36776 959 aaKnown RBP12.56□□□□□ -0.4
IRF1-204ENST00000439555 UBA7P41226 1012 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 ARHGAP8P85298 464 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 RAB33AQ14088 237 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 PSMD5Q16401 504 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 UVSSAQ2YD98 709 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 ZNF568Q3ZCX4 644 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 MPZL3Q6UWV2 235 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 SLC44A3Q8N4M1 653 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 SMG7Q92540 1137 aaKnown RBP12.56□□□□□ -0.4
IRF1-204ENST00000439555 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 ACAP3Q96P50 834 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 TCHPQ9BT92 498 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 CXCL16Q9H2A7 254 aa12.56□□□□□ -0.4
IRF1-204ENST00000439555 EPS15L1Q9UBC2 864 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms