RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 AGPAT3Q9NRZ7 376 aa14.46□□□□□ -0.09
PCNX3-202ENST00000439247 CYP26A1O43174 497 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 GNAT1P11488 350 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 PTDSS1P48651 473 aaKnown RBP14.46□□□□□ -0.1
PCNX3-202ENST00000439247 CACNB3P54284 484 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 PPP3CAQ08209 521 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 AP1ARQ63HQ0 302 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 PPP1R18Q6NYC8 613 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 RFWD3Q6PCD5 774 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 CROCCP2Q86T23 111 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 ERMNQ8TAM6 284 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 FBF1Q8TES7 1133 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 NKIRAS1Q9NYS0 192 aa14.46□□□□□ -0.1
PCNX3-202ENST00000439247 IGKV6D-41A0A0C4DH26 115 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 RASA4BC9J798 803 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 RASA4O43374 803 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 SMIM24O75264 130 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 LGR5O75473 907 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 CCNG1P51959 295 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 UBXN2AP68543 259 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 EPC2Q52LR7 807 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 RNF220Q5VTB9 566 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 PHC3Q8NDX5 983 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 STK32AQ8WU08 396 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 SLC7A6OSQ96CW6 309 aaPredicted RBP14.45□□□□□ -0.1
PCNX3-202ENST00000439247 DENND2DQ9H6A0 471 aaPredicted RBP14.45□□□□□ -0.1
PCNX3-202ENST00000439247 FRMD4BQ9Y2L6 1034 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 ADCY8P40145 1251 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 MXRA7P84157 204 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 TRMT1LQ7Z2T5 733 aaKnown RBP14.45□□□□□ -0.1
PCNX3-202ENST00000439247 C4orf33Q8N1A6 199 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 SLC5A5Q92911 643 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 DYDC2Q96IM9 177 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 FIZ1Q96SL8 496 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 METTL5Q9NRN9 209 aaKnown RBP14.45□□□□□ -0.1
PCNX3-202ENST00000439247 CYP39A1Q9NYL5 469 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 WRAP73Q9P2S5 460 aaPredicted RBP14.45□□□□□ -0.1
PCNX3-202ENST00000439247 VAV3Q9UKW4 847 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 PHTF1Q9UMS5 762 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 LRRC42Q9Y546 428 aa14.45□□□□□ -0.1
PCNX3-202ENST00000439247 CYP3A7-CYP3A51PA0A087WV96 503 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 FGFR1P11362 822 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 HSPA6P17066 643 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 RRM1P23921 792 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 CYP3A7P24462 503 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 GBP1P32455 592 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 RFC5P40937 340 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 NT5C2P49902 561 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 ERFP50548 548 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 GABPAQ06546 454 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 APOBEC3HQ6NTF7 200 aaKnown RBP14.44□□□□□ -0.1
PCNX3-202ENST00000439247 ZNF653Q96CK0 615 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 FAM163AQ96GL9 167 aaPredicted RBP14.44□□□□□ -0.1
PCNX3-202ENST00000439247 FAM84AQ96KN4 292 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 CRKP46108 304 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
PCNX3-202ENST00000439247 BFSP1Q12934 665 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 TMEM154Q6P9G4 183 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 LRRC37BQ96QE4 947 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 RAB3IPQ96QF0 476 aaPredicted RBP14.44□□□□□ -0.1
PCNX3-202ENST00000439247 SH2D3AQ9BRG2 576 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 WNT8AQ9H1J5 351 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 LRMDAQ9H2I8 198 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 EYA4O95677 639 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 SHMT1P34896 483 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 ICA1Q05084 483 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 ARHGEF18Q6ZSZ5 1173 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 FAM178BQ8IXR5 827 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 SYCP3Q8IZU3 236 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 C12orf65Q9H3J6 166 aaKnown RBP14.44□□□□□ -0.1
PCNX3-202ENST00000439247 OLFML3Q9NRN5 406 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 ANAPC5Q9UJX4 755 aa14.44□□□□□ -0.1
PCNX3-202ENST00000439247 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.44□□□□□ -0.1
PCNX3-202ENST00000439247 A0A1W2PRG0 241 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 POC1B-GALNT4F8VUJ3 575 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 LUC7L3O95232 432 aaKnown RBP14.43□□□□□ -0.1
PCNX3-202ENST00000439247 RBM5P52756 815 aaKnown RBP eCLIP14.43□□□□□ -0.1
PCNX3-202ENST00000439247 RWDD2BP57060 319 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 NFIAQ12857 509 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 ODR4Q5SWX8 454 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 C1orf186Q6ZWK4 172 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 ZNF720Q7Z2F6 126 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 PSPC1Q8WXF1 523 aaKnown RBP14.43□□□□□ -0.1
PCNX3-202ENST00000439247 CRYGNQ8WXF5 182 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 SNF8Q96H20 258 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 MBOAT7Q96N66 472 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 TSC22D3Q99576 134 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 LRRC19Q9H756 370 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 PARVGQ9HBI0 331 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 TXLNGQ9NUQ3 528 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 DLGAP2Q9P1A6 1054 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 CALRP27797 417 aaKnown RBP14.43□□□□□ -0.1
PCNX3-202ENST00000439247 STRN3Q13033 797 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 KHDC1Q4VXA5 237 aaKnown RBP14.43□□□□□ -0.1
PCNX3-202ENST00000439247 CDC42EP5Q6NZY7 148 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 HS2ST1Q7LGA3 356 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 EPS8L1Q8TE68 723 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 WHRNQ9P202 907 aa14.43□□□□□ -0.1
PCNX3-202ENST00000439247 FER1L6Q2WGJ9 1857 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms