RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 CCDC173Q0VFZ6 552 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 PAK2Q13177 524 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 ZACNQ401N2 412 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 EPC2Q52LR7 807 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 PLEKHG4Q58EX7 1191 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 DCAF17Q5H9S7 520 aaPredicted RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 FIGNQ5HY92 759 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 MRPL10Q7Z7H8 261 aaKnown RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 CREBRFQ8IUR6 639 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 THNSL1Q8IYQ7 743 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 CXorf38Q8TB03 319 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 CGRRF1Q99675 332 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 NXF3Q9H4D5 531 aaKnown RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 TMEM8AQ9HCN3 771 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 TOPORSQ9NS56 1045 aaPredicted RBP10.52□□□□□ -0.73
CUBN-204ENST00000438254 ALPK3Q96L96 1907 aa10.52□□□□□ -0.73
CUBN-204ENST00000438254 KIAA0355O15063 1070 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 NOL4O94818 638 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 IL18RAPO95256 599 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 PARNO95453 639 aaKnown RBP10.51□□□□□ -0.73
CUBN-204ENST00000438254 TPM2P07951 284 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 CLTBP09497 229 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 CXCL8P10145 99 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 ATF7P17544 494 aaPredicted RBP10.51□□□□□ -0.73
CUBN-204ENST00000438254 MATR3P43243 847 aaKnown RBP eCLIP10.51□□□□□ -0.73
CUBN-204ENST00000438254 GCLMP48507 274 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 KLK7P49862 253 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 NFX1Q12986 1120 aaKnown RBP10.51□□□□□ -0.73
CUBN-204ENST00000438254 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 SYCP1Q15431 976 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 SURF1Q15526 300 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 ZBTB6Q15916 424 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 TCTN1Q2MV58 587 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 FKBP15Q5T1M5 1219 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 TCERG1LQ5VWI1 586 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 SPECC1LQ69YQ0 1117 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
CUBN-204ENST00000438254 RTN4RL1Q86UN2 441 aaPredicted RBP10.51□□□□□ -0.73
CUBN-204ENST00000438254 WDR49Q8IV35 697 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 EFCAB13Q8IY85 973 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 OR5B17Q8NGF7 314 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 CCDC127Q96BQ5 260 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 LRCH3Q96II8 777 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 FAM84AQ96KN4 292 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 SNX27Q96L92 541 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 CXCL16Q9H2A7 254 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 GANQ9H2C0 597 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 HIPK3Q9H422 1215 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 ASB7Q9H672 318 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 PLEKHA5Q9HAU0 1116 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 SIX2Q9NPC8 291 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 PLCB1Q9NQ66 1216 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 FAM105AQ9NUU6 356 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 IMPACTQ9P2X3 320 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 IPPQ9Y573 584 aa10.51□□□□□ -0.73
CUBN-204ENST00000438254 A0A0U1RQF3 1178 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 TRIM43BA6NCK2 446 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 LACTBL1A8MY62 500 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 C9IYK1 514 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 RNF225M0QZC1 329 aaPredicted RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 EPHB6O15197 1021 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 STX10O60499 249 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 N4BP1O75113 896 aaKnown RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 RECQL4O94761 1208 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 VNN1O95497 513 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 GYPCP04921 128 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 ITGB8P26012 769 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 PON1P27169 355 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 MXI1P50539 228 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 OSTNP61366 133 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 FAM189BP81408 668 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 MYL7Q01449 175 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 TMEM132AQ24JP5 1023 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 TDRD10Q5VZ19 366 aaKnown RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 KRT39Q6A163 491 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 SCARA3Q6AZY7 606 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 TMC6Q7Z403 805 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 APBB1IPQ7Z5R6 666 aaPredicted RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 USP37Q86T82 979 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 CD302Q8IX05 232 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 CRIPAKQ8N1N5 446 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 GSTCDQ8NEC7 633 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 SEMA4DQ92854 862 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 TRIM43Q96BQ3 446 aaPredicted RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 ACAP3Q96P50 834 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 IFIH1Q9BYX4 1025 aaKnown RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 RPF1Q9H9Y2 349 aaKnown RBP10.5□□□□□ -0.73
CUBN-204ENST00000438254 RGS18Q9NS28 235 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 SNTG2Q9NY99 539 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 CNTN3Q9P232 1028 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 FBXL5Q9UKA1 691 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 ATP11BQ9Y2G3 1177 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 C2CD2Q9Y426 696 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 HES2Q9Y543 173 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 PCDHB2Q9Y5E7 798 aa10.5□□□□□ -0.73
CUBN-204ENST00000438254 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms