RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 ADAM15Q13444 863 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 USP41Q3LFD5 358 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 ARMCX5Q6P1M9 558 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 FUT10Q6P4F1 479 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 ADGRD2Q7Z7M1 963 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 EFHBQ8N7U6 833 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 GLIS3Q8NEA6 775 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 ENGASEQ8NFI3 743 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 KIF12Q96FN5 646 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 TIGD1Q96MW7 591 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
CTSD-205ENST00000438213 PAAF1Q9BRP4 392 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 IKZF4Q9H2S9 585 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 ASB7Q9H672 318 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 MRPL17Q9NRX2 175 aaKnown RBP17.81■□□□□ 0.44
CTSD-205ENST00000438213 CLDND1Q9NY35 253 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 CGNQ9P2M7 1197 aaKnown RBP17.81■□□□□ 0.44
CTSD-205ENST00000438213 PCDHGC5Q9Y5F6 944 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 PLXNA4Q9HCM2 1894 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 COL6A3P12111 3177 aa17.81■□□□□ 0.44
CTSD-205ENST00000438213 SF3B1O75533 1304 aaKnown RBP eCLIP17.8■□□□□ 0.441e-6■■■■■ 113
CTSD-205ENST00000438213 HIDE1A8MVS5 230 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 PER2O15055 1255 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 B3GAT3O94766 335 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 KIF20AO95235 890 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 URODP06132 367 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 CYP3A5P20815 502 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 CLCNKBP51801 687 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 DPYDQ12882 1025 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 SNW1Q13573 536 aaKnown RBP17.8■□□□□ 0.44
CTSD-205ENST00000438213 COL19A1Q14993 1142 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 DUSP6Q16828 381 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 UPP1Q16831 310 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 ZBTB41Q5SVQ8 909 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 HS2ST1Q7LGA3 356 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 GPR65Q8IYL9 337 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 SCFD1Q8WVM8 642 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 HERC2P3Q9BVR0 1158 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 VN1R3Q9BXE9 311 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 EMILIN2Q9BXX0 1053 aa17.8■□□□□ 0.44
CTSD-205ENST00000438213 UBE2ZQ9H832 354 aaPredicted RBP17.8■□□□□ 0.44
CTSD-205ENST00000438213 UBQLN1Q9UMX0 589 aaKnown RBP17.8■□□□□ 0.44
CTSD-205ENST00000438213 CITO14578 2027 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.79■□□□□ 0.44
CTSD-205ENST00000438213 TMEM189-UBE2V1I3L0A0 370 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 MEFVO15553 781 aaPredicted RBP17.79■□□□□ 0.44
CTSD-205ENST00000438213 EXTL3O43909 919 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 RHOBTB3O94955 611 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 IL18RAPO95256 599 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 EFEMP2O95967 443 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 SRGAP2BP0DMP2 458 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 GTF2F1P35269 517 aaKnown RBP eCLIP17.79■□□□□ 0.44
CTSD-205ENST00000438213 HOXD13P35453 343 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 GLUD2P49448 558 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 STK4Q13043 487 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 KNOP1Q1ED39 458 aaKnown RBP17.79■□□□□ 0.44
CTSD-205ENST00000438213 BMT2Q1RMZ1 405 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 CTC1Q2NKJ3 1217 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 NELFCDQ8IXH7 590 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 C18orf25Q96B23 403 aaPredicted RBP17.79■□□□□ 0.44
CTSD-205ENST00000438213 CBWD1Q9BRT8 395 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 FAM213AQ9BRX8 229 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 PCIF1Q9H4Z3 704 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 CACNG4Q9UBN1 327 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 DERAQ9Y315 318 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 TRIP11Q15643 1979 aa17.79■□□□□ 0.44
CTSD-205ENST00000438213 F8W810 466 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 PODXLO00592 558 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 KINO60870 393 aaKnown RBP17.78■□□□□ 0.44
CTSD-205ENST00000438213 KIF4AO95239 1232 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 SMC2O95347 1197 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 PRR29P0C7W0 189 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 KCNA5P22460 613 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 DSG1Q02413 1049 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 SOX4Q06945 474 aaPredicted RBP17.78■□□□□ 0.44
CTSD-205ENST00000438213 SPAG1Q07617 926 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 KCNB1Q14721 858 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 ZBTB6Q15916 424 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 KIAA0319Q5VV43 1072 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 CRELD2Q6UXH1 353 aaPredicted RBP17.78■□□□□ 0.44
CTSD-205ENST00000438213 PPFIBP1Q86W92 1011 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
CTSD-205ENST00000438213 GPD1LQ8N335 351 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 BEST2Q8NFU1 509 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 GOLGA5Q8TBA6 731 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 HASPINQ8TF76 798 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 NOC3LQ8WTT2 800 aaKnown RBP17.78■□□□□ 0.44
CTSD-205ENST00000438213 AUTS2Q8WXX7 1259 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 SAAL1Q96ER3 474 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 GOLGA2P5Q9HBQ8 144 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 CHST7Q9NS84 486 aa17.78■□□□□ 0.44
CTSD-205ENST00000438213 BRWD1Q9NSI6 2320 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 ZNF233A6NK53 670 aa17.77■□□□□ 0.44
CTSD-205ENST00000438213 TULP1O00294 542 aaPredicted RBP17.77■□□□□ 0.44
CTSD-205ENST00000438213 C2CD2LO14523 706 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms