RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 FAM13CQ8NE31 585 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 STK32AQ8WU08 396 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PWWP2AQ96N64 755 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 HSD17B14Q9BPX1 270 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 OLFML3Q9NRN5 406 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 DLGAP2Q9P1A6 1054 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 FRMD4BQ9Y2L6 1034 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PCDHA3Q9Y5H8 950 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 EPHB2P29323 1055 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 VPS41P49754 854 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 CWF19L1Q69YN2 538 aaKnown RBP13.2□□□□□ -0.3
TMEM116-202ENST00000437003 ZNF746Q6NUN9 644 aaPredicted RBP13.2□□□□□ -0.3
TMEM116-202ENST00000437003 RUNDC3BQ96NL0 473 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 PCIF1Q9H4Z3 704 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 TXLNGQ9NUQ3 528 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 CYP39A1Q9NYL5 469 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 LRRC42Q9Y546 428 aa13.2□□□□□ -0.3
TMEM116-202ENST00000437003 ATRNL1Q5VV63 1379 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 TCP10L2B9ZVM9 353 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 ATMINO43313 823 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-202ENST00000437003 EXOC3O60645 756 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 GAS7O60861 476 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PYGMP11217 842 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 GAP43P17677 238 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 CHRNA5P30532 468 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 FOXN2P32314 431 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PTDSS1P48651 473 aaKnown RBP13.19□□□□□ -0.3
TMEM116-202ENST00000437003 SEL1L2Q5TEA6 688 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 UBL4BQ8N7F7 174 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 ACER1Q8TDN7 264 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 ART4Q93070 314 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 SH2D3AQ9BRG2 576 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 MOV10L1Q9BXT6 1211 aaKnown RBP13.19□□□□□ -0.3
TMEM116-202ENST00000437003 KIAA1683Q9H0B3 1180 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 IRAK4Q9NWZ3 460 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-202ENST00000437003 WRAP73Q9P2S5 460 aaPredicted RBP13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PCYOX1Q9UHG3 505 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 TISP43B9A030 160 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 LGR5O75473 907 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 CBX6O95503 412 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 APBA3O96018 575 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 ATP6V1C1P21283 382 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 ANXA13P27216 316 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PEX5P50542 639 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 DNAJC3Q13217 504 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PPP1R15BQ5SWA1 713 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 SLC20A1Q8WUM9 679 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 UCMAQ8WVF2 138 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 BTBD6Q96KE9 485 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PPP1R12CQ9BZL4 782 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 INTS2Q9H0H0 1204 aaKnown RBP13.19□□□□□ -0.3
TMEM116-202ENST00000437003 AAASQ9NRG9 546 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 NKIRAS1Q9NYS0 192 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
TMEM116-202ENST00000437003 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 DLATP10515 647 aaKnown RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 POLE2P56282 527 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 MRPS35P82673 323 aaKnown RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 MYL7Q01449 175 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 KLC1Q07866 573 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 MTFR1Q15390 333 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 ZRSR2Q15696 482 aaKnown RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 FLAD1Q8NFF5 587 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 C1orf54Q8WWF1 131 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 ROPN1BQ9BZX4 212 aaPredicted RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 ROPN1Q9HAT0 212 aaPredicted RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 SLCO1B3Q9NPD5 702 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 AGPAT3Q9NRZ7 376 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 A0A1B0GVG6 124 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 SPAG7O75391 227 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 PSMD10O75832 226 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 WFS1O76024 890 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 CETPP11597 493 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 TAC1P20366 129 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 COMTP21964 271 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 CTNNA2P26232 953 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 TRAF1Q13077 416 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 SERPINB12Q96P63 405 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 ZSWIM1Q9BR11 485 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 TBC1D10AQ9BXI6 508 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 HERC5Q9UII4 1024 aaKnown RBP13.18□□□□□ -0.3
TMEM116-202ENST00000437003 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 CHKBQ9Y259 395 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 BRWD3Q6RI45 1802 aa13.18□□□□□ -0.3
TMEM116-202ENST00000437003 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms