RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 HNRNPDLO14979 420 aaKnown RBP20■□□□□ 0.79
HMGN1-207ENST00000436324 STAT6P42226 847 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 UPP1Q16831 310 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 SLC10A6Q3KNW5 377 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 ZC2HC1CQ53FD0 456 aaPredicted RBP20■□□□□ 0.79
HMGN1-207ENST00000436324 CCDC73Q6ZRK6 1079 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 SFR1Q86XK3 245 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 DDX12PQ92771 950 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 UROC1Q96N76 676 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 NECTIN4Q96NY8 510 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 FIZ1Q96SL8 496 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 SLC38A7Q9NVC3 462 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 RAPGEFL1Q9UHV5 662 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
HMGN1-207ENST00000436324 MYH11P35749 1972 aa20■□□□□ 0.79
HMGN1-207ENST00000436324 F13A1P00488 732 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 CXCL8P10145 99 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 COL9A1P20849 921 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 BRCC3P46736 316 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 SPAG1Q07617 926 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 ELAVL2Q12926 359 aaKnown RBP19.99■□□□□ 0.79
HMGN1-207ENST00000436324 PKP1Q13835 747 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 PSMD5Q16401 504 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 CD300LGQ6UXG3 332 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 TMEM130Q8N3G9 435 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 C3orf58Q8NDZ4 430 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 TBC1D7Q9P0N9 293 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 CNTN3Q9P232 1028 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 FNIP2Q9P278 1114 aa19.99■□□□□ 0.79
HMGN1-207ENST00000436324 PODXLO00592 558 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 TGM5O43548 720 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 GPR37L1O60883 481 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 RFPL2O75678 378 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 KCNE1P15382 129 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 TNFSF9P41273 254 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 CREMQ03060 361 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 HERC4Q5GLZ8 1057 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-207ENST00000436324 ZBTB41Q5SVQ8 909 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 GPR149Q86SP6 731 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 GPR65Q8IYL9 337 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 LNX1Q8TBB1 728 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-207ENST00000436324 PIK3R5Q8WYR1 880 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 DDX27Q96GQ7 796 aaKnown RBP19.98■□□□□ 0.79
HMGN1-207ENST00000436324 NR2E1Q9Y466 385 aa19.98■□□□□ 0.79
HMGN1-207ENST00000436324 CCDC195A0A1B0GUA6 201 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 C2CD4DB7Z1M9 353 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 ANKRD63C9JTQ0 380 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 TMEM189-UBE2V1I3L0A0 370 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 ADAM12O43184 909 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 PPP6R2O75170 966 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 CLTAP09496 248 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 IDEP14735 1019 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 TKTP29401 623 aaKnown RBP19.97■□□□□ 0.79
HMGN1-207ENST00000436324 GTF2BQ00403 316 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 SLC39A4Q6P5W5 647 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 ELMSAN1Q6PJG2 1045 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-207ENST00000436324 STAMQ92783 540 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 KCNN1Q92952 543 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 DNAJC19Q96DA6 116 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 FAM212AQ96EL1 285 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 CLSTN3Q9BQT9 956 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 MSTO1Q9BUK6 570 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 IKZF4Q9H2S9 585 aa19.97■□□□□ 0.79
HMGN1-207ENST00000436324 TISP43B9A030 160 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 OGTO15294 1046 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 TRAPPC3O43617 180 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 YEATS4O95619 227 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 PIGRP01833 764 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 SCP2P22307 547 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 LILRA6Q6PI73 481 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 ZNF720Q7Z2F6 126 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 MAP4K3Q8IVH8 894 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 KREMEN2Q8NCW0 462 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 KIF12Q96FN5 646 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 MRPL44Q9H9J2 332 aaKnown RBP19.96■□□□□ 0.79
HMGN1-207ENST00000436324 TUBGCP4Q9UGJ1 667 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 DPP7Q9UHL4 492 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 MUC3AQ02505 3323 aa19.96■□□□□ 0.79
HMGN1-207ENST00000436324 LACTBL1A8MY62 500 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 CUTAO60888 179 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 PDIA4P13667 645 aaKnown RBP19.95■□□□□ 0.78
HMGN1-207ENST00000436324 FGFR3P22607 806 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 RPL9P32969 192 aaKnown RBP19.95■□□□□ 0.78
HMGN1-207ENST00000436324 PPP2R3AQ06190 1150 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 PLEKHA4Q9H4M7 779 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 RPF1Q9H9Y2 349 aaKnown RBP19.95■□□□□ 0.78
HMGN1-207ENST00000436324 PLEKHA5Q9HAU0 1116 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 NUB1Q9Y5A7 615 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 TRIP11Q15643 1979 aa19.95■□□□□ 0.78
HMGN1-207ENST00000436324 A0A0B4J269 797 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 TTC26A0AVF1 554 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 TULP1O00294 542 aaPredicted RBP19.94■□□□□ 0.78
HMGN1-207ENST00000436324 GAP43P17677 238 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 ABCD1P33897 745 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 OR1D2P34982 312 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 ENOX2Q16206 610 aaKnown RBP19.94■□□□□ 0.78
HMGN1-207ENST00000436324 PDXDC1Q6P996 788 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 SHC4Q6S5L8 630 aa19.94■□□□□ 0.78
HMGN1-207ENST00000436324 CCDC149Q6ZUS6 474 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms