RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 UROC1Q96N76 676 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 FOXQ1Q9C009 403 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 CDT1Q9H211 546 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 AVENQ9NQS1 362 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ARHGAP28Q9P2N2 729 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 DNMT3BQ9UBC3 853 aaKnown RBP12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 OTOGLQ3ZCN5 2332 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 PHLPP2Q6ZVD8 1323 aa12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 EP300Q09472 2414 aaPredicted RBP12.05□□□□□ -0.48
SPTLC1P4-201ENST00000435997 COL4A3Q01955 1670 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 VWA8A3KMH1 1905 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 MEFVO15553 781 aaPredicted RBP12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 TBC1D4O60343 1298 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 LMNAP02545 664 aaKnown RBP12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SP9P0CG40 484 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 PROZP22891 400 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 OR1D2P34982 312 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 GRM5P41594 1212 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 MAPK7Q13164 816 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 NBR1Q14596 966 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SLC5A9Q2M3M2 681 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 PABPC1LQ4VXU2 614 aaKnown RBP12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ANKS3Q6ZW76 656 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 CEP120Q8N960 986 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 IFT74Q96LB3 600 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 GOLGA2P5Q9HBQ8 144 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 HCFC1R1Q9NWW0 138 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 LIMCH1Q9UPQ0 1083 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 CDY1Q9Y6F8 540 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SPTBN4Q9H254 2564 aa12.04□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SMIM28A0A1B0GU29 152 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 KANSL1LA0AUZ9 987 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ARHGEF37A1IGU5 675 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SHISA7A6NL88 538 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 LIG1P18858 919 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 NPTX2P47972 431 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 TOB1P50616 345 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 HMGN5P82970 282 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ROR1Q01973 937 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 PRKCQQ04759 706 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 MLF2Q15773 248 aaPredicted RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 TMEM132AQ24JP5 1023 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ZC3H14Q6PJT7 736 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 CCDC83Q8IWF9 413 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 SHDQ96IW2 340 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ZMAT2Q96NC0 199 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 ACO2Q99798 780 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 OSBPL6Q9BZF3 934 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 TMEM134Q9H6X4 195 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 CNTN3Q9P232 1028 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 R4GN57 208 aa12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 MTCL1Q9Y4B5 1905 aaKnown RBP12.03□□□□□ -0.48
SPTLC1P4-201ENST00000435997 WDR27A2RRH5 827 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 I3L4J1 428 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 STK25O00506 426 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SYN3O14994 580 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 LRRN2O75325 713 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ECI2O75521 394 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ABLIM3O94929 683 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SEC24BO95487 1268 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 RHOP08100 348 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KCNE1P15382 129 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 RFX1P22670 979 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 FCARP24071 287 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 BRCC3P46736 316 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PFKPQ01813 784 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 DMP1Q13316 513 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SNW1Q13573 536 aaKnown RBP12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PDIA5Q14554 519 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZNF568Q3ZCX4 644 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PRSS36Q5K4E3 855 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 APBB1IPQ7Z5R6 666 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SUMF1Q8NBK3 374 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KIF2CQ99661 725 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KXD1Q9BQD3 176 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 RUSC1Q9BVN2 902 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MRPL4Q9BYD3 311 aaKnown RBP12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 POLD4Q9HCU8 107 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 DDX19AQ9NUU7 478 aaKnown RBP12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SLC38A7Q9NVC3 462 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 GDE1Q9NZC3 331 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 POLIQ9UNA4 740 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 KIAA1024Q9UPX6 916 aa12.02□□□□□ -0.49
SPTLC1P4-201ENST00000435997 K7ERI5 159 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PODXLO00592 558 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 TRAPPC3O43617 180 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 HIP1RO75146 1068 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ID4P47928 161 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 PEX3P56589 373 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 MRPL58Q14197 206 aaKnown RBP12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 IL17AQ16552 155 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 ZNF528Q3MIS6 628 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 SLC44A4Q53GD3 710 aa12.01□□□□□ -0.49
SPTLC1P4-201ENST00000435997 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms