RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZACNQ401N2 412 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 PSPC1Q8WXF1 523 aaKnown RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 ZNF516Q92618 1163 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 EPB41L4BQ9H329 900 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 SNX24Q9Y343 169 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 MYH9P35579 1960 aaKnown RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 ATXN2Q99700 1313 aaKnown RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 SPDYE16A6NNV3 312 aaPredicted RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 USP2O75604 605 aaPredicted RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 PIGRP01833 764 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 FNTAP49354 379 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 PLTPP55058 493 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 SKIDA1Q1XH10 827 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 KRT71Q3SY84 523 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 FBXO25Q8TCJ0 367 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 ELMO3Q96BJ8 720 aa19.9■□□□□ 0.78
CLK1-205ENST00000434813 PABPC3Q9H361 631 aaKnown RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 MAFBQ9Y5Q3 323 aaPredicted RBP19.9■□□□□ 0.78
CLK1-205ENST00000434813 TCRBV7S2A1N4TA0A589 114 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 OATP04181 439 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 MYBL1P10243 752 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 ICAM3P32942 547 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 COILP38432 576 aaPredicted RBP19.89■□□□□ 0.77
CLK1-205ENST00000434813 MAGEA9P43362 315 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 PMS2P54278 862 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 STRN3Q13033 797 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 TRIM11Q96F44 468 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 PAGR1Q9BTK6 254 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 PCDHB2Q9Y5E7 798 aa19.89■□□□□ 0.77
CLK1-205ENST00000434813 ATG7O95352 703 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 RPL21P46778 160 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 PPP2R2AP63151 447 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 IFFO1Q0D2I5 559 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 HOOK3Q86VS8 718 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 FNBP1Q96RU3 617 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 PLVAPQ9BX97 442 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 FAM129AQ9BZQ8 928 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 PORCNQ9H237 461 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 DHX33Q9H6R0 707 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 ZNF302Q9NR11 478 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 HOXC10Q9NYD6 342 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 AFG3L2Q9Y4W6 797 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 CSADQ9Y600 493 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 FAM169AQ9Y6X4 670 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 ADM5C9JUS6 153 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 SORBS3O60504 671 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 C4BPAP04003 597 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 RARAP10276 462 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 ATP4AP20648 1035 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 NAMPTP43490 491 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 BPIFB4P59827 614 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 SP2Q02086 613 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 WDR44Q5JSH3 913 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 TDRD10Q5VZ19 366 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 B4GALNT4Q76KP1 1039 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 SPATS2Q86XZ4 545 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 MCOLN2Q8IZK6 566 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 DNERQ8NFT8 737 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 ZNF526Q8TF50 670 aaPredicted RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 FAM84AQ96KN4 292 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 MTRF1LQ9UGC7 380 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 ANAPC7Q9UJX3 599 aa19.88■□□□□ 0.77
CLK1-205ENST00000434813 AGO2Q9UKV8 859 aaKnown RBP19.88■□□□□ 0.77
CLK1-205ENST00000434813 PASKQ96RG2 1323 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 HLA-DRAP01903 254 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 MAPK4P31152 587 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 PIK3CAP42336 1068 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 NLRP11P59045 1033 aaKnown RBP19.87■□□□□ 0.77
CLK1-205ENST00000434813 SLC20A2Q08357 652 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 VGLL4Q14135 290 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 STXBP2Q15833 593 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 CYFIP1Q7L576 1253 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 ASAP3Q8TDY4 903 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 SLCO2A1Q92959 643 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 TLCD1Q96CP7 247 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 LRRC19Q9H756 370 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 BCCIPQ9P287 314 aaKnown RBP eCLIP19.87■□□□□ 0.77
CLK1-205ENST00000434813 NOVA2Q9UNW9 492 aaKnown RBP19.87■□□□□ 0.77
CLK1-205ENST00000434813 MROH7Q68CQ1 1323 aa19.87■□□□□ 0.77
CLK1-205ENST00000434813 FSCN2O14926 492 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 CYP1A1P04798 512 aaPredicted RBP19.86■□□□□ 0.77
CLK1-205ENST00000434813 PAEPP09466 180 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 TNNI1P19237 187 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 GLRA2P23416 452 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 ARL2P36404 184 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 WNT7BP56706 349 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 CENPCQ03188 943 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 LMBRD2Q68DH5 695 aaPredicted RBP19.86■□□□□ 0.77
CLK1-205ENST00000434813 NLRP14Q86W24 1093 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 CCDC105Q8IYK2 499 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 CHST13Q8NET6 341 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 MYCBPAPQ8TBZ2 947 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 A0A0G2JMZ2 1700 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 PTPRJQ12913 1337 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 FAM107AO95990 144 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 NF2P35240 595 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 SLC1A1P43005 524 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 IREB2P48200 963 aaKnown RBP19.86■□□□□ 0.77
CLK1-205ENST00000434813 DENND2CQ68D51 928 aa19.86■□□□□ 0.77
CLK1-205ENST00000434813 SLFN12LQ6IEE8 588 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms