RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 MAFAQ8NHW3 353 aaPredicted RBP23.27■■□□□ 1.32
TOP3B-205ENST00000434517 GDPD5Q8WTR4 605 aa23.27■■□□□ 1.32
TOP3B-205ENST00000434517 ZMAT2Q96NC0 199 aaKnown RBP23.27■■□□□ 1.32
TOP3B-205ENST00000434517 FAN1Q9Y2M0 1017 aa23.27■■□□□ 1.32
TOP3B-205ENST00000434517 PRG3Q9Y2Y8 225 aaPredicted RBP23.27■■□□□ 1.32
TOP3B-205ENST00000434517 EPOPA6NHQ4 379 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 CASTOR2A6NHX0 329 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 RFXAPO00287 272 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 BMP6P22004 513 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 SNRNP35Q16560 246 aaKnown RBP23.26■■□□□ 1.31
TOP3B-205ENST00000434517 CBWD2Q8IUF1 395 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 P2RX5Q93086 422 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 CDX2Q99626 313 aaPredicted RBP23.26■■□□□ 1.31
TOP3B-205ENST00000434517 ASB7Q9H672 318 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 SPG21Q9NZD8 308 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 PLXNA4Q9HCM2 1894 aa23.26■■□□□ 1.31
TOP3B-205ENST00000434517 H3BNC9 293 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 NRP1O14786 923 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 XPOTO43592 962 aaKnown RBP23.25■■□□□ 1.31
TOP3B-205ENST00000434517 FGF18O76093 207 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 ADRB2P07550 413 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 CD44P16070 742 aaKnown RBP23.25■■□□□ 1.31
TOP3B-205ENST00000434517 NR2F2P24468 414 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 RPL13P26373 211 aaKnown RBP23.25■■□□□ 1.31
TOP3B-205ENST00000434517 JADE1Q6IE81 842 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 SLC9A9Q8IVB4 645 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 SLC39A11Q8N1S5 342 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 SYAP1Q96A49 352 aaPredicted RBP23.25■■□□□ 1.31
TOP3B-205ENST00000434517 C18orf25Q96B23 403 aaPredicted RBP23.25■■□□□ 1.31
TOP3B-205ENST00000434517 TMEM169Q96HH4 297 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 DHTKD1Q96HY7 919 aaPredicted RBP23.25■■□□□ 1.31
TOP3B-205ENST00000434517 FBXL18Q96ME1 805 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 TSPAN18Q96SJ8 248 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 CACNG4Q9UBN1 327 aa23.25■■□□□ 1.31
TOP3B-205ENST00000434517 COL9A1P20849 921 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 KRT17Q04695 432 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 MYBPC2Q14324 1141 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 TMEM132DQ14C87 1099 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 NAB2Q15742 525 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 EDRF1Q3B7T1 1238 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 CEP135Q66GS9 1140 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 CENPPQ6IPU0 288 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 CAVIN1Q6NZI2 390 aaKnown RBP23.24■■□□□ 1.31
TOP3B-205ENST00000434517 COLEC11Q9BWP8 271 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 GOLGA2P5Q9HBQ8 144 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 ALG13Q9NP73 1137 aaKnown RBP23.24■■□□□ 1.31
TOP3B-205ENST00000434517 DMAC2Q9NW81 257 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 UBQLN1Q9UMX0 589 aaKnown RBP23.24■■□□□ 1.31
TOP3B-205ENST00000434517 CTNND2Q9UQB3 1225 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 FRMD4BQ9Y2L6 1034 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 DERAQ9Y315 318 aa23.24■■□□□ 1.31
TOP3B-205ENST00000434517 PPP1R3GB7ZBB8 358 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 ITGB1P05556 798 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 NFICP08651 508 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 CCNE1P24864 410 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 NFIL3Q16649 462 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 ZCWPW2Q504Y3 356 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 TMEM174Q8WUU8 243 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 NELFBQ8WX92 580 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 RABGGTAQ92696 567 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 UROC1Q96N76 676 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 GAS2L1Q99501 681 aaPredicted RBP23.23■■□□□ 1.31
TOP3B-205ENST00000434517 TUBGCP4Q9UGJ1 667 aa23.23■■□□□ 1.31
TOP3B-205ENST00000434517 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.23■■□□□ 1.31
TOP3B-205ENST00000434517 TRIM49BA6NDI0 452 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 LRRC63Q05C16 580 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 SOX4Q06945 474 aaPredicted RBP23.22■■□□□ 1.31
TOP3B-205ENST00000434517 CYP24A1Q07973 514 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 PAK1Q13153 545 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 ADAM9Q13443 819 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 SURF1Q15526 300 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 ANKRD40Q6AI12 368 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 TMEM173Q86WV6 379 aaPredicted RBP23.22■■□□□ 1.31
TOP3B-205ENST00000434517 BEST2Q8NFU1 509 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 IGSF21Q96ID5 467 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 PAAF1Q9BRP4 392 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 PDE11AQ9HCR9 933 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 TMEM63CQ9P1W3 806 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 CHD7Q9P2D1 2997 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 PUF60Q9UHX1 559 aaKnown RBP23.22■■□□□ 1.31
TOP3B-205ENST00000434517 C2CD2Q9Y426 696 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 PRUNE2Q8WUY3 3088 aa23.22■■□□□ 1.31
TOP3B-205ENST00000434517 BICDL2A1A5D9 508 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 CETN3O15182 167 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 GRM6O15303 877 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 CSPG5O95196 566 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 CYP3A5P20815 502 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 CLCNKBP51801 687 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 PMS1P54277 932 aaKnown RBP23.21■■□□□ 1.31
TOP3B-205ENST00000434517 WNT7BP56706 349 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 NLRP12P59046 1061 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 TFAMQ00059 246 aaKnown RBP23.21■■□□□ 1.31
TOP3B-205ENST00000434517 PLCB3Q01970 1234 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 KLHL40Q2TBA0 621 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 RBM43Q6ZSC3 357 aaKnown RBP23.21■■□□□ 1.31
TOP3B-205ENST00000434517 NT5DC4Q86YG4 428 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 MLKLQ8NB16 471 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 BCL7CQ8WUZ0 217 aaPredicted RBP23.21■■□□□ 1.31
TOP3B-205ENST00000434517 POF1BQ8WVV4 589 aa23.21■■□□□ 1.31
TOP3B-205ENST00000434517 CCDC127Q96BQ5 260 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms