RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 KRT10P13645 584 aa16.65■□□□□ 0.26
SCARF1-203ENST00000434376 ATP4AP20648 1035 aa16.65■□□□□ 0.26
SCARF1-203ENST00000434376 STAT5BP51692 787 aa16.65■□□□□ 0.26
SCARF1-203ENST00000434376 CCDC137Q6PK04 289 aaKnown RBP16.65■□□□□ 0.26
SCARF1-203ENST00000434376 UBL4BQ8N7F7 174 aa16.65■□□□□ 0.26
SCARF1-203ENST00000434376 LRRN4Q8WUT4 740 aa16.65■□□□□ 0.26
SCARF1-203ENST00000434376 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 UBA1P22314 1058 aaKnown RBP16.64■□□□□ 0.25
SCARF1-203ENST00000434376 NSFP46459 744 aaKnown RBP16.64■□□□□ 0.25
SCARF1-203ENST00000434376 CYP24A1Q07973 514 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 Q3C1V9 767 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 FMO2Q99518 471 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 SH3GL2Q99962 352 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 HOXC10Q9NYD6 342 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 AFG3L2Q9Y4W6 797 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 CST3P01034 146 aaPredicted RBP16.64■□□□□ 0.25
SCARF1-203ENST00000434376 MYZAPP0CAP1 466 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 GLRA2P23416 452 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 SFNP31947 248 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 CDH8P55286 799 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 MAGOHP61326 146 aaKnown RBP16.64■□□□□ 0.25
SCARF1-203ENST00000434376 TAS1R3Q7RTX0 852 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 CPLX4Q7Z7G2 160 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 MTFR1LQ9H019 292 aa16.64■□□□□ 0.25
SCARF1-203ENST00000434376 DGAT1O75907 488 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 BRD2P25440 801 aaKnown RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 SMAD1Q15797 465 aaKnown RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 SMTNL2Q2TAL5 461 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 CCDC13Q8IYE1 715 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 ZDHHC14Q8IZN3 488 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 EPN3Q9H201 632 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 KLC4Q9NSK0 619 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 GPRC5DQ9NZD1 345 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 GGT7Q9UJ14 662 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 SUFUQ9UMX1 484 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 LRRC37AA6NMS7 1700 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 MKI67P46013 3256 aaKnown RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 ARIH2O95376 493 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 TGFB2P61812 414 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 TDRD10Q5VZ19 366 aaKnown RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 CATSPERGQ6ZRH7 1159 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 MYCBPAPQ8TBZ2 947 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 NEK9Q8TD19 979 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 ZBED3Q96IU2 234 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 HAUS2Q9NVX0 235 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 GOLGA8MH3BSY2 632 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 LRRC14Q15048 493 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 PTGISQ16647 500 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 CCDC33Q8N5R6 958 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 THOC1Q96FV9 657 aaKnown RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 APOL6Q9BWW8 343 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 HAPLN2Q9GZV7 340 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 TXNRD2Q9NNW7 524 aa16.63■□□□□ 0.25
SCARF1-203ENST00000434376 SAE1Q9UBE0 346 aaPredicted RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 DBR1Q9UK59 544 aaKnown RBP16.63■□□□□ 0.25
SCARF1-203ENST00000434376 TCF4P15884 667 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 SGO2Q562F6 1265 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 CYP4F22Q6NT55 531 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 TTC27Q6P3X3 843 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 JAMLQ86YT9 394 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 KIFAP3Q92845 792 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 SUCLA2Q9P2R7 463 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 GTPBP10A4D1E9 387 aaKnown RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 DDX3YO15523 660 aaKnown RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 USP2O75604 605 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 SUPT20HL2P0C7V6 817 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 MAPTP10636 758 aaKnown RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 SUPT20HL1Q3ZLR7 823 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 C10orf76Q5T2E6 689 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 HELQQ8TDG4 1101 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 SEMA4AQ9H3S1 761 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 TMEM8AQ9HCN3 771 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 GDF3Q9NR23 364 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 CHST7Q9NS84 486 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 ADAM22Q9P0K1 906 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 RPTORQ8N122 1335 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 GNA15P30679 374 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 MDH1P40925 334 aaKnown RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 UAP1Q16222 522 aaPredicted RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 XKR3Q5GH77 459 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 KCNT1Q5JUK3 1230 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 TMEM192Q8IY95 271 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 SCFD2Q8WU76 684 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
SCARF1-203ENST00000434376 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 BAIAP2L1Q9UHR4 511 aa16.62■□□□□ 0.25
SCARF1-203ENST00000434376 RTN2O75298 545 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 OATP04181 439 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 ZNF280AP59817 542 aaPredicted RBP16.61■□□□□ 0.25
SCARF1-203ENST00000434376 TRPC3Q13507 836 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 DCUN1D2Q6PH85 259 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 CNPY4Q8N129 248 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 MCPH1Q8NEM0 835 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 HES6Q96HZ4 224 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 ATP6V1G3Q96LB4 118 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 SPATA33Q96N06 139 aa16.61■□□□□ 0.25
SCARF1-203ENST00000434376 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms