RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 OAZ1P54368 228 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 SLC39A4Q6P5W5 647 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 ZSWIM2Q8NEG5 633 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 CDHR1Q96JP9 859 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 CCDC114Q96M63 670 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 PLCD4Q9BRC7 762 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 KLC4Q9NSK0 619 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 STYXL1Q9Y6J8 313 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 LOC285556D6RIA3 1793 aa14.6□□□□□ -0.07
COL6A3-207ENST00000433762 CCT8L1PA6NM43 557 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 CHUKO15111 745 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 CYP1A1P04798 512 aaPredicted RBP14.59□□□□□ -0.07
COL6A3-207ENST00000433762 POTEJP0CG39 1038 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 PSMD6Q15008 389 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 NBPF9Q3BBW0 867 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ANO5Q75V66 913 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 LARGE2Q8N3Y3 721 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 RMDN3Q96TC7 470 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 TRAIPQ9BWF2 469 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 GPRC5CQ9NQ84 441 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 PKD2L1Q9P0L9 805 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 SAMD15Q9P1V8 674 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ARHGAP28Q9P2N2 729 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ZNF219Q9P2Y4 722 aaPredicted RBP14.59□□□□□ -0.07
COL6A3-207ENST00000433762 COL4A5P29400 1685 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 GOLGA8IPA6NC78 632 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 GOLGA8JA6NMD2 632 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 NDC80O14777 642 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 EXTL3O43909 919 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 PIGRP01833 764 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 KRT17Q04695 432 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 TNFAIP1Q13829 316 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 VSIG10LQ86VR7 867 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ATL2Q8NHH9 583 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 POMGNT1Q8WZA1 660 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 SGSM3Q96HU1 749 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 SELENOSQ9BQE4 189 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 LRRC4CQ9HCJ2 640 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 SLC40A1Q9NP59 571 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ANAPC7Q9UJX3 599 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ZNRF3Q9ULT6 936 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
COL6A3-207ENST00000433762 MYPNQ86TC9 1320 aa14.58□□□□□ -0.07
COL6A3-207ENST00000433762 TCRBV7S2A1N4TA0A589 114 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 TP73O15350 636 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 ATMINO43313 823 aaPredicted RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 STBD1O95210 358 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 EIF2AK2P19525 551 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 IVDP26440 423 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 SCTRP47872 440 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 MKRN3Q13064 507 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 CNGA2Q16280 664 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 RIBC1Q8N443 379 aaPredicted RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 TTLL6Q8N841 843 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 CCHCR1Q8TD31 782 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 SAAL1Q96ER3 474 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 DCLK3Q9C098 648 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 CDC42EP4Q9H3Q1 356 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 MRPL47Q9HD33 250 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 LGALS13Q9UHV8 139 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 CNTN6Q9UQ52 1028 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 MYH9P35579 1960 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 RLFQ13129 1914 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 C21orf2O43822 256 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 PROSCO94903 275 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 TTC4O95801 387 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 PSAPP07602 524 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 LMNB2Q03252 620 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 CCNG2Q16589 344 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 ZACNQ401N2 412 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 WDR44Q5JSH3 913 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 LIN9Q5TKA1 542 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 ARHGEF16Q5VV41 709 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 KATNAL2Q8IYT4 538 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 MDM1Q8TC05 714 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 CCDC127Q96BQ5 260 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 DDX27Q96GQ7 796 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 IFT74Q96LB3 600 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 RAVER2Q9HCJ3 691 aaKnown RBP14.58□□□□□ -0.08
COL6A3-207ENST00000433762 AAASQ9NRG9 546 aa14.58□□□□□ -0.08
COL6A3-207ENST00000433762 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 PHIPQ8WWQ0 1821 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 TLDC2A0PJX2 215 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 DNM1LO00429 736 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 CLDN3O15551 220 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 ATP9AO75110 1047 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 RAD17O75943 681 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 ABHD2P08910 425 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 FGFR4P22455 802 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 IFI35P80217 286 aaPredicted RBP14.57□□□□□ -0.08
COL6A3-207ENST00000433762 KLF1Q13351 362 aaPredicted RBP14.57□□□□□ -0.08
COL6A3-207ENST00000433762 MON1BQ7L1V2 547 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 GBP7Q8N8V2 638 aaPredicted RBP14.57□□□□□ -0.08
COL6A3-207ENST00000433762 CCDC89Q8N998 374 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 EPS8L3Q8TE67 593 aaKnown RBP14.57□□□□□ -0.08
COL6A3-207ENST00000433762 IPO4Q8TEX9 1081 aaKnown RBP14.57□□□□□ -0.08
COL6A3-207ENST00000433762 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 ATP6V0A4Q9HBG4 840 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 SLC12A4Q9UP95 1085 aa14.57□□□□□ -0.08
COL6A3-207ENST00000433762 NEU2Q9Y3R4 380 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms